Gene SeSA_A1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1457 
Symbol 
ID6517809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1406921 
End bp1408162 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content47% 
IMG OID642746573 
Productinner membrane transport protein YdiM 
Protein accessionYP_002114378 
Protein GI194738034 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0786899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.351467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCG GCATCTCTGA GTCAGATAAT ATGAAAAATC GTTATTTCCC TACCGCTGTA 
GGGTTATATT TTAATTACTT TGTACATGGC ATGGGGGTTA TCCTGATGAG CCTGAACATG 
TCATCGCTTG AACAGCAATG GCATACCAGT GCCGCTGGCG TATCTATTGT GATCTCTTCG 
CTTGGTATTG GCCGGTTAAG CGTTTTGTTA ATCGCCGGTA TGCTTTCCGA TCGCTTTGGT 
CGCCGTCCTT TTATCATTCT GGGGATCGCC TGTTACCTGA TTTTTTTCAT TGGCATTCTC 
TATGCTCAGA CGATTTGTGT CGCTTATGCC TGTGGCTTTT TAGCAGGTAT GGCCAACAGT 
TTTTTGGATG CAGGTACCTA TCCCAGTTTG ATGGAAGCCT TCCCTCGCTC CCCCAGTACG 
GCAAATATCC TGATCAAAGC ATTTGTCTCT GGCGGACAAT TCTTGTTGCC CATTATTATT 
AGTTTATTAG TCTGGGCTAA TATGTGGTTT GGCTGGTCCT TCCTGCTTGC CGGGGCGATC 
ATGCTTATTA ATGCTCTGTT TTTATTACGC TGCCCTTTTC CACCCTATCC TGGTCGGATA 
TTGAAGCCTA AAATCTCGCA AGCGCCTGTC GCAGGCGCAC ATCATTGCTC CCTCATCGAT 
CTTATCAGCT ACACCCTTTA TGGCTATATC TCGATGGCAA CCTTTTATCT TATCAGCCAG 
TGGCTGGCGC AGTATGGACA GTTCGTCGCA GGCATGTCGT ATACCCAATC CATCAAACTG 
TTAAGTATTT ATACCTGCGG ATCGCTACTG TGCGTTTTTA TTACCGCTCC GTTGGTCAGA 
AAAACAATTC GTTCTACCAC ATTATTGATG TTTTATACCT TTATCTCTTT TATTGCGCTT 
CTGACGGTCT GCCTGCATCC TCAGGTCTAT GTTGTTATGA TCTTCGCATT CGTCATTGGA 
TTCTCTTCCG CCGGTGGCGT AGTACAAATC GGCCTGACGC TGATGGCGGC CCGTTTTCCA 
CGGGAGAAAG GTAAAGCGAC CGGCATCTAT TACAGCGCCG GCAGTATCGC GACGTTCACT 
ATTCCGTTGA TCACGGCGCG GATTTCAGAA ATGAGCATTG CACATATTAT GTGGTTTGAT 
ACCGGTATCG CCGCAGCGGG ATTTCTCCTC GCGCTATTCA TCGGTTACCG AAGTCGGGCT 
GAATCACAAC ACCACGCTGA AGCAGCGTCG ACTGCGCAAT AA
 
Protein sequence
MSGGISESDN MKNRYFPTAV GLYFNYFVHG MGVILMSLNM SSLEQQWHTS AAGVSIVISS 
LGIGRLSVLL IAGMLSDRFG RRPFIILGIA CYLIFFIGIL YAQTICVAYA CGFLAGMANS 
FLDAGTYPSL MEAFPRSPST ANILIKAFVS GGQFLLPIII SLLVWANMWF GWSFLLAGAI 
MLINALFLLR CPFPPYPGRI LKPKISQAPV AGAHHCSLID LISYTLYGYI SMATFYLISQ 
WLAQYGQFVA GMSYTQSIKL LSIYTCGSLL CVFITAPLVR KTIRSTTLLM FYTFISFIAL 
LTVCLHPQVY VVMIFAFVIG FSSAGGVVQI GLTLMAARFP REKGKATGIY YSAGSIATFT 
IPLITARISE MSIAHIMWFD TGIAAAGFLL ALFIGYRSRA ESQHHAEAAS TAQ