Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1190 |
Symbol | putP |
ID | 6517237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1170655 |
End bp | 1172163 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746314 |
Product | sodium/proline symporter |
Protein accession | YP_002114123 |
Protein GI | 194733910 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.969329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTA GCACACCGAT GTTGGTGACA TTCTGTGTCT ATATTTTTGG CATGATATTG ATTGGGTTTA TCGCCTGGCG CTCAACCAAA AACTTTGATG ACTATATTCT TGGCGGTCGC AGCCTGGGGC CGTTTGTTAC GGCTTTATCA GCCGGCGCGT CGGATATGAG CGGCTGGCTG TTAATGGGGC TGCCTGGCGC TATCTTTCTG TCGGGGATCT CTGAAAGCTG GATCGCCATT GGCCTGACGT TAGGCGCATG GATTAACTGG AAGCTGGTGG CCGGGCGCCT GCGCGTGCAT ACCGAATTTA ACAATAACGC GCTCACGTTG CCGGACTATT TTACCGGTCG GTTTGAGGAT AAGAGCCGAG TCCTGCGTAT TATTTCCGCG CTGGTCATTC TGCTGTTTTT CACTATCTAT TGCGCGTCAG GTATTGTCGC TGGAGCACGA CTGTTCGAAA GCACCTTCGG TATGAGCTAT GAAACCGCAC TGTGGGCGGG GGCCGCGGCA ACCATTATTT ATACCTTTAT CGGCGGGTTT CTTGCCGTTA GCTGGACGGA TACCGTTCAG GCCAGCCTGA TGATTTTTGC GTTAATCCTG ACGCCGGTGA TGGTTATTGT CGGCGTAGGC GGTTTTAGCG AGTCGCTGGA GGTGATCAAG CAAAAGAGCA TCGAGAATGT CGACATGCTC AAGGGGCTGA ATTTTGTCGC CATTATTTCC CTGATGGGCT GGGGACTGGG TTACTTCGGT CAGCCGCATA TCCTGGCGCG CTTTATGGCG GCGGACTCCC ATCACAGCAT TGTTCATGCG CGTCGTATCA GTATGACCTG GATGATTCTG TGTCTGGCGG GCGCGGTGGC GGTGGGCTTC TTTGGCATTG CGTACTTTAA CAATAACCCC GCGCTGGCCG GGGCGGTGAA CCAAAACTCA GAGCGCGTAT TTATTGAACT GGCGCAGATC CTGTTTAACC CGTGGATTGC CGGTGTTCTG CTGTCTGCTA TCCTGGCGGC GGTGATGTCG ACGTTGAGCT GTCAGTTGCT GGTATGCTCC AGCGCGATTA CGGAAGATTT ATATAAGGCT TTTCTGCGTA AAAGCGCCAG CCAGCAAGAG CTGGTATGGG TAGGGCGAGT GATGGTGCTG GTGGTAGCGC TGATCGCCAT TGCGCTGGCG GCGAATCCCG ATAACCGTGT GCTGGGGCTG GTGAGCTACG CCTGGGCTGG ATTCGGCGCG GCATTTGGAC CTGTTGTCCT GTTTTCTGTG ATGTGGTCGC GTATGACACG TAACGGCGCG CTGGCGGGAA TGATTATTGG CGCGGTGACG GTTATCGTCT GGAAACAATA TGGCTGGCTG GATCTGTATG AGATCATCCC TGGCTTCATT TTCGGCAGCC TGGGGATCGT AATCTTTAGC CTGCTTGGCA AAGCGCCGAC AGCAGCGATG CAGGAACGCT TTGCAAAAGC GGACGCGCAT TATCATTCCG CGCCGCCGTC GAAGCTACAG GCGGAATAA
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Protein sequence | MAISTPMLVT FCVYIFGMIL IGFIAWRSTK NFDDYILGGR SLGPFVTALS AGASDMSGWL LMGLPGAIFL SGISESWIAI GLTLGAWINW KLVAGRLRVH TEFNNNALTL PDYFTGRFED KSRVLRIISA LVILLFFTIY CASGIVAGAR LFESTFGMSY ETALWAGAAA TIIYTFIGGF LAVSWTDTVQ ASLMIFALIL TPVMVIVGVG GFSESLEVIK QKSIENVDML KGLNFVAIIS LMGWGLGYFG QPHILARFMA ADSHHSIVHA RRISMTWMIL CLAGAVAVGF FGIAYFNNNP ALAGAVNQNS ERVFIELAQI LFNPWIAGVL LSAILAAVMS TLSCQLLVCS SAITEDLYKA FLRKSASQQE LVWVGRVMVL VVALIAIALA ANPDNRVLGL VSYAWAGFGA AFGPVVLFSV MWSRMTRNGA LAGMIIGAVT VIVWKQYGWL DLYEIIPGFI FGSLGIVIFS LLGKAPTAAM QERFAKADAH YHSAPPSKLQ AE
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