Gene SeSA_A0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0833 
Symbol 
ID6519989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp803137 
End bp803820 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content50% 
IMG OID642745967 
Productintegrase, catalytic region 
Protein accessionYP_002113783 
Protein GI194735723 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000063104 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCG ATAAAACGCT GAATATCGGA CGGGACCGTC TGTTTAATCT GCTGGGTGAA 
TACCGGCTCC TGGTACCCGT GAAACGGGCA TATCACAAAA CCACCAACAG CCATCATCGC 
TTTTACCGGC ATCCTAACTT GCTGAAACCC GGCCCTGAAC AGGTTACCGC CCTTGAGCCA 
GAACAGGTCT GGGTCGCCGA TATTACTTAT CTTCCACTAC GCAGCGGCAC GGCCTATCTG 
AGTCTGGTCA CCGATGCCTG CTCCAGAAAA ATCGTGGGTT ACCATGTCGG GGAAAACCTG 
CAGACAGAAA ATGTGGTAAA GGCGTTCAGG CAGGCTCTGA GGCGGAGAAA AACGACAGGT 
CCGCTGGTAC ATCACTCTGA CAGAGGACTG CAATACTGTT CGGTACTTTA TCAGTCAGTT 
CATGAGCGAA ACGGAATAAC CTGTTCAATG ACCGATGGTT ACGACTGCTA CCAGAATGCG 
CTGGCTGAGA GAATAAACGG GATACTGAAA AATGAGTTTT TACTCTCGCG TCCTGCAGAC 
CTGGCGCAAG CGCGGGAAAT AGTAAAAGAG TCCGTGGCAA TTTATAACCA TGAACGGCCA 
CACCTGGCCC TGAAATACAA AACGCCCGAT GATGTTCATC AGGCGTTTTA CAGACAAAAA 
ACTGTCAACC TATATCAGGA CTAG
 
Protein sequence
MQADKTLNIG RDRLFNLLGE YRLLVPVKRA YHKTTNSHHR FYRHPNLLKP GPEQVTALEP 
EQVWVADITY LPLRSGTAYL SLVTDACSRK IVGYHVGENL QTENVVKAFR QALRRRKTTG 
PLVHHSDRGL QYCSVLYQSV HERNGITCSM TDGYDCYQNA LAERINGILK NEFLLSRPAD 
LAQAREIVKE SVAIYNHERP HLALKYKTPD DVHQAFYRQK TVNLYQD