Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0027 |
Symbol | |
ID | 6516741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 29467 |
End bp | 29982 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642745203 |
Product | fimbrial protein |
Protein accession | YP_002113035 |
Protein GI | 194737224 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0443558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0275442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTGA TGCTGTGTCC ACAAATCAAT GCCAGCGCTG ACGACCTCGC TTATAACCTC GAATTTACCG GCACTATTGT GGCGCAAACC TGCGACATAG ATATTTCCAG CCTCAGTCAA AGTATTGATT TAGGGCAGTT TGCGGTCGGC GATTTTCCTT CGACAGGAAC AACGACAAAA TTTAAGCCCT TTAATATCAA CCTCAAAAAT TGTTCCCGAG GAATTGCCGG GGCGAAGATC TGGTTTACCG GCGAACCCGA TCCGGACAAT CCCGCGCTAC TGGCGATAAC CGATACCGGG ATGGGAAGCG GAAACATGTT AGCAAGCGGG GTAGGGGTGG AAATTCTGAA TGATGATCAG GATACCATCA GTATCAATAA TGCCGACTCA GTGGTCTATC CGTTGAAAGC CGGACGCAAC ACGCTGTCTT TTTATATTCG CTATAAATCG ACCCGGCCTA CGGTCACGTC CGGGAACGCG ACGGCGGTCA TGTATTTCGA TATGCAGTAT GAATGA
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Protein sequence | MGLMLCPQIN ASADDLAYNL EFTGTIVAQT CDIDISSLSQ SIDLGQFAVG DFPSTGTTTK FKPFNINLKN CSRGIAGAKI WFTGEPDPDN PALLAITDTG MGSGNMLASG VGVEILNDDQ DTISINNADS VVYPLKAGRN TLSFYIRYKS TRPTVTSGNA TAVMYFDMQY E
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