Gene SeSA_A0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0020 
Symbol 
ID6515857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp17869 
End bp19968 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content51% 
IMG OID642745196 
Productexochitinase 
Protein accessionYP_002113028 
Protein GI194737593 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.857408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.13273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA GCAAACTGAT TCAAGGCGAT ACAATTACTG AAACTACCCA TGCAGCGAAT 
GGTTTTGACC CTGCAACAAG CGATGATAAA ATAAGCTATA CTTCCGCTCG TGTTGCGAAA
CCGGTATACA ATAAATATAA AAATTCCACG ACTAAACCGA AGGTATTCGG TTATTACACC
GACTGGTCAC AGTATGACAG CCGTCTGCAA GGCAATATGT CCCAACCGGG CCGTGGTTAT
GATTTAACCA ACGTTTCACC GACGGCTTAT GACAAACTGA TTTTCGGCTT TGTTGGCATC
ACCGGTTTCA GAAAAATTGA TAAAGAAAAC CGCGATGTCG TAGCAGAAGC GGCAGCACAG
TGCGGCAAAG TGAAATATGA GCCGACCTTC CTCGATCCGT GGGGCGATTT CCAGTCTTAT
ATCAACCTGG GTTTTGAAAC CAGCGGCTGG GATGTTGATC CGAAAACCGT GACCCAGGCT
AACGCCAAAG GTATGCTGGG CGCACTGCGT GATATGCAGG CAAAAGCGAA AGCCGCAGGT
CACACGCTGG CGCTCTCCAT GAGTATCGGC GGCTGGAGCA TGAGTAACGG GTTCCACGAA
ACCGCCGCTT CTGACTCTTC TCGTAAAATC TTCGCCAAAG GCGTGGTGAA ACTGTTCAAA
CAGTTCCCGA TGTTCAGCGA AGTGGATATT GACTGGGAAT ACCCGAACGA TGAAGGGGCG
GGCAACCCGT TTGGTCCGGA AGATGGCGCT AACTACGCGC TGCTGATTGC CGAACTGCGT
AAACAGCTGG ATTCCGCTGG TCTGAGCAAT GTGAAGATCT CTATCGCTGC TTCCGCAGTG
ACCACGATTT TTGATCACGC TAACGTAAAA GATCTGCTGG CTGCCGGCCT GTATGGCATC
AACCTGATGA CCTATGATTT CTTCGGTACG CCGTGGGCGG AAACGCTTGG CCACCATACC
AACCGCAAAG CGCTGGAAGA GGGCGGCTGG GCTGTCGAAA CCATCGTTGA TCACCTGCTG
GCGGAAGGTT TCTCCGCTGA CCGTATCAAC ATCGGTTATG CTGGCTATAC CCGTAACGCT
CGTCAGGCAG AAATTGAATC CCTGTCGCCG CTGAAAGGTT CTTATAACCC GGGAACAGGT
GACACTACAG GTTCTTTCGA ATCCGGCACC AGCGAATGGT ATGACGTCAT TTATAGCTAC
CTGGATCTGG AAAACCAGAA AGGTCGTAAC GGTTTCAACG TTTACACCGA CCAGGTCGCT
GACGCTGACT ACCTGTATAG CCCGGAATCC AAACTGTTTT TATCCCTGGA TACGCCGCGT
ACTGTCAAAG CAAAAGGCGA ATATGCAGCG AAACTGGGCC TGGGCGGCGT GTTTACCTGG
ACTATCGATC AGGACAACGG CGTGCTGGTT AACGCCGTGC GTGAAGGTCT GGGTTATGAA
ATCGAATCTG AAGTTATTGA TATGGAACCG TTCTACTTCG AAGGTATCAA TGTAGAAAAT
GGTGAAGAAC AGAGCGATAG CGACGACGCG CAGAAAGTCA ACCACGCGCC GAAAGCGGCG
ATTGAACTGC TGGTCGTAGG CGGATCTACG GTACAGCTGT CTGGCGCAGG TTCTTCTGAT
GAAGATAGTG ATGAATTGTC CTTTAGCTGG GGCGTGCCTT CTCAAATCGC TGTGGCAGAC
AAAACGGCAG AAATCATTGA GGTTGTGGTA CCGGAAGTTA GCGAAAAAAC AGCCTTTCAG
TTCACCCTGT TTGTACGCGA CTGCTACAAC GAACCGTCTT CTCAACAGCG CTTTGTTCTG
ACGGCTGTGC CTGCGCTATC TCAGGTTCAA CCGGAACCGG AAGAGGAAGA AGAGATTATC
GTTCCTGTAC CGGACGAGGA AGAAGATACC ACGCCGGCTG AGGATGATAC GCCAGCAGAT
GACAAAACGT CACCTTACGC GCAGTGGGAT GCTTTGACCG TTTATGGCGC AAACTGGGGT
TCTTTCGAAA TCGTTAGCTG GAAAGGCCAT AACTATCAGG TGAAATGGTG GTCTATGGGC
AACCAGCCTG ACCTGAACTG CGGTGTCGGC GGTGCATGGA CCGATCTTGG CGCTTACTAA
 
Protein sequence
MATSKLIQGD TITETTHAAN GFDPATSDDK ISYTSARVAK PVYNKYKNST TKPKVFGYYT 
DWSQYDSRLQ GNMSQPGRGY DLTNVSPTAY DKLIFGFVGI TGFRKIDKEN RDVVAEAAAQ
CGKVKYEPTF LDPWGDFQSY INLGFETSGW DVDPKTVTQA NAKGMLGALR DMQAKAKAAG
HTLALSMSIG GWSMSNGFHE TAASDSSRKI FAKGVVKLFK QFPMFSEVDI DWEYPNDEGA
GNPFGPEDGA NYALLIAELR KQLDSAGLSN VKISIAASAV TTIFDHANVK DLLAAGLYGI
NLMTYDFFGT PWAETLGHHT NRKALEEGGW AVETIVDHLL AEGFSADRIN IGYAGYTRNA
RQAEIESLSP LKGSYNPGTG DTTGSFESGT SEWYDVIYSY LDLENQKGRN GFNVYTDQVA
DADYLYSPES KLFLSLDTPR TVKAKGEYAA KLGLGGVFTW TIDQDNGVLV NAVREGLGYE
IESEVIDMEP FYFEGINVEN GEEQSDSDDA QKVNHAPKAA IELLVVGGST VQLSGAGSSD
EDSDELSFSW GVPSQIAVAD KTAEIIEVVV PEVSEKTAFQ FTLFVRDCYN EPSSQQRFVL
TAVPALSQVQ PEPEEEEEII VPVPDEEEDT TPAEDDTPAD DKTSPYAQWD ALTVYGANWG
SFEIVSWKGH NYQVKWWSMG NQPDLNCGVG GAWTDLGAY