Gene SeHA_C4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4900 
Symbol 
ID6492154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4782648 
End bp4783523 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content51% 
IMG OID642744945 
ProductHNH nuclease 
Protein accessionYP_002048517 
Protein GI194447803 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG ACAAAACCCT AAAGCAAGCG ATATCAAATA TTACTATTTG GCGCAAAGGC 
GAACAGCGAG CGCCGCATAA GCCGTTATTG CTGTTATATG TCCTCTCGCA CTATCGGCAG 
GGGCACGATC GTCTATTTGA TTATGGTTCT GAAATTCATG AGCAATTGCT GGATTTGCTG 
GAGCGCTATG GGCCACAGCG CCGTGAGCAG CGCCCGGATA TGCCGTTCTG GCGTTTGAAG 
GGCGATGGTT TCTGGGAATT GCAAAACGCG GAATTCTGCT CAACCAGCGG TAGCCGCCAG 
CCACCTAAAC GTGAACTCAT TGAATATAAT GTTGCTGGTG GGTTTGATGC CGTCAATTTC 
GCGCTGGTAA CAAAAAAACG TAAGCTAATC GACGCGCTGG CGCAGCAGAT CCTTGAGGCG 
CATTTTCCGA CCAGTATTCA GGAAGACATC GCTGACGAGA TGGGTTTTGA TATTCGCACC 
TCTCTCCGTC AACGCGATCC GAAGTTCCGC CAGGCGGTGC TACGAGCTTA CAATTATCAA 
TGTGCGGTCT GCGGCTTCAA TATGCGCCAC GACAACGCCC CTATAGCCCT TGAAGCAGCC 
CATATCAGAT GGAAGCAGCA TCATGGTCCT TGTGAAGTAC CTAATGGCCT GGCGTTGTGC 
GCAATTCATC ATAAAGCGTT CGATCGTGGT TCGATTGGCC TGGATGAAAA TATGCGTGTG 
GTGGTTTCCG ACGCGGTGAA TGGTGGCGGG GTGGTACAGC GGCTGTTCTG GGATTTTGCG 
GGGAAAGAGA TCGCGTTGCC GCAGATGAAA GAAAATTATC CGGGTGAACG GTTTGTGGAA 
TGGCATAGGA AAGAGGTGTT CAGAGGAGGG CATTGA
 
Protein sequence
MTSDKTLKQA ISNITIWRKG EQRAPHKPLL LLYVLSHYRQ GHDRLFDYGS EIHEQLLDLL 
ERYGPQRREQ RPDMPFWRLK GDGFWELQNA EFCSTSGSRQ PPKRELIEYN VAGGFDAVNF 
ALVTKKRKLI DALAQQILEA HFPTSIQEDI ADEMGFDIRT SLRQRDPKFR QAVLRAYNYQ 
CAVCGFNMRH DNAPIALEAA HIRWKQHHGP CEVPNGLALC AIHHKAFDRG SIGLDENMRV 
VVSDAVNGGG VVQRLFWDFA GKEIALPQMK ENYPGERFVE WHRKEVFRGG H