Gene SeHA_C3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3064 
Symbol 
ID6489818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2992350 
End bp2993279 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content41% 
IMG OID642743219 
Producttranscriptional regulator HilD 
Protein accessionYP_002046838 
Protein GI194448716 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0281413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.145015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG TAACCTTTGT AAGTAATAGT CATCAGCGTC CTGCCGCAGA TAACTTACAG 
AAATTAAAAT CACTTTTGAC AAATACCCGG CAGCAAATTA AAAGTCAGAC TCAGCAGGTT
ACCATCAAAA ATCTTTATGT AAGCAGTTTC ACTTTAGTTT GCTTTCGGAG CGGTAAACTG
ACGATTAGCA ATAATCACGA TACGATTTAC TGTGACGAAC CTGGGATGTT GGTGCTCAAA
AAAGAGCAGG TAGTTAACGT GACGCTTGAA GAGGTCAATG GCCACATGGA TTTCGATATA
CTCGAGATAC CGACGCAACG ACTTGGCGCT CTCTATGCAC TTATCCCAAA CGAGCAGCAA
ACCAAAATGG CGGTACCCAC AGAGAAAGCG CAGAAAATCA TCTATACGCC TGACTTTCCT
GCCAGAAGAG AGGTATTTGA ACATCTGAAA ACGGCGTTCT CCTGTACGAA GGATACAAGC
AAAGGTTGCA GTAACTGTAA CAACAAGAGT TGTATTGAAA ATGAAGAGTT AATTCCTTAT
TTTCTGCTGT TCCTGCTTAC TGCTTTTCTC CGACTCCCGG AGAGTTATGA GATCATCCTT
AGCTCGGCTC AGATAACGTT AAAGGAGCGC GTTTACAACA TTATATCTTC GTCACCCAGT
AGACAGTGGA AGCTTACGGA TGTTGCCGAT CATATATTTA TGAGTACGTC AACGCTCAAA
CGGAAACTTG CAGAAGAAGG TACCAGCTTT AGCGACATCT ACTTATCGGC AAGAATGAAT
CAGGCAGCAA AACTTTTACG CATAGGCAAC CATAATGTTA ATGCTGTAGC ATTAAAATGT
GGTTATGATA GCACGTCCTA CTTCATTCAA TGTTTCAAAA AATATTTTAA AACTACGCCA
TCGACATTCA TAAAAATGGC GAACCATTAA
 
Protein sequence
MENVTFVSNS HQRPAADNLQ KLKSLLTNTR QQIKSQTQQV TIKNLYVSSF TLVCFRSGKL 
TISNNHDTIY CDEPGMLVLK KEQVVNVTLE EVNGHMDFDI LEIPTQRLGA LYALIPNEQQ
TKMAVPTEKA QKIIYTPDFP ARREVFEHLK TAFSCTKDTS KGCSNCNNKS CIENEELIPY
FLLFLLTAFL RLPESYEIIL SSAQITLKER VYNIISSSPS RQWKLTDVAD HIFMSTSTLK
RKLAEEGTSF SDIYLSARMN QAAKLLRIGN HNVNAVALKC GYDSTSYFIQ CFKKYFKTTP
STFIKMANH