Gene SeHA_C1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1963 
Symbol 
ID6488278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1914526 
End bp1915950 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content53% 
IMG OID642742168 
Producthypothetical protein 
Protein accessionYP_002045811 
Protein GI194450544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.321067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCC TCTTATCTTT TGTTGTAGAA GTTGCCGACA CGTTGAGCCG TATTGTTTTT 
CGTTCATTCT CACTCTCGCT TCTCTTGCTG GCTGCCAGCG GTACGATCCG TGCGCAGGCG
CAAGATCCTT TCACGCAAAA CCGTCTGCCG GATTTAGGCA TGATGCCGGA ATCCCACGAA
GGGGAAAAGC ATTTTGCCGA GATGGCCAAA GCGTTTGGCG AAGCCAGCAT GAAAAATAAC
GATCTGGATA CTGGTGAACA GGCGCGGCAA TTCGCTTTCG GACAGGTACG CGATGTGGTC
AGCGAGCAGG TTAACCAGCA GCTTGAAAGC TGGCTATCAG CCTGGGGCAG CGCCAGCGTG
GATATTAACG TCGATAACGA AGGTCATTTT AACGGCAGTC GCGGAAGCTG GTTTATCCCT
TTACAGGATA AACAGCGCTA TCTGACCTGG AGCCAGCTTG GTCTTACGCA ACAGACTGAC
GGACTGGTAA GCAACATTGG CGTAGGACAG CGCTGGGCGC AGGATGGCTG GCTTCTTGGC
TATAATACCT TTTACGATAA TCTGCTGGAT GAAAATCTAC AGCGCGCCGG CTTTGGCGCG
GAGGCGTGGG GAGAATATTT GCGTTTATCC GCCAACTATT ATCAGCCTTT TGCCGACTGG
CAGACGCATA CGGCGACCTT AGAACAGCGA ATGGCGCGCG GATATGATAT CAACGCGCAA
ATGCGCCTGC CGTTTTACCA GCATATCAAT ACCAGCGTTA GTCTGGAGCA GTACTTTGGC
GATAGCGTGG ATCTGTTTGA CTCCGGAACG GGGTATCACA ATCCTGTCGC GTTAAAACTG
GGTCTCAACT ATACGCCAGT ACCTTTGCTT ACCATGACCG CCCAGCACAA ACAGGGCGAG
AGCGGGGTCA GTCAAAATAA CCTGGGGCTG ACGCTTAACT ACCGCTTCGG CGTGCCGCTC
AAAAAGCAGC TTGCCGCCAG TGAAGTGGCG CAAAGCCAGT CATTACGCGG TAGCCGCTAT
GATACGCCGC AACGTAACTC GCTGCCGACA ATGGAGTATC GGCAGCGTAA AACGTTAACG
GTTTTTCTGG CGACGCCGCC CTGGGATCTT ACGCCTGGTG AGACGGTTGC GTTAAAATTG
CAGGTGCGCA GCGTGCACGG TATTCGTCAT TTGAGCTGGC AGGGCGATAC ACAGGCATTA
AGTTTGACGG CAGGAACGGA CACCCGCAGT ACCGAGGGCT GGACAATCAT TATGCCGGCC
TGGGATCACC GCGAAGGCGC GGCAAATCGC TGGCGTTTAT CGGTGGTGGT TGAGGATGAA
AAAGGTCAGC GTGTCTCTTC CAATGAGATC ACGCTCGCGC TGACTGAACC GTTTATCACG
ATGCCGGACG ATAATCCGCA TTGGCAACCG TTCCAGGAGC AATAA
 
Protein sequence
MSFLLSFVVE VADTLSRIVF RSFSLSLLLL AASGTIRAQA QDPFTQNRLP DLGMMPESHE 
GEKHFAEMAK AFGEASMKNN DLDTGEQARQ FAFGQVRDVV SEQVNQQLES WLSAWGSASV
DINVDNEGHF NGSRGSWFIP LQDKQRYLTW SQLGLTQQTD GLVSNIGVGQ RWAQDGWLLG
YNTFYDNLLD ENLQRAGFGA EAWGEYLRLS ANYYQPFADW QTHTATLEQR MARGYDINAQ
MRLPFYQHIN TSVSLEQYFG DSVDLFDSGT GYHNPVALKL GLNYTPVPLL TMTAQHKQGE
SGVSQNNLGL TLNYRFGVPL KKQLAASEVA QSQSLRGSRY DTPQRNSLPT MEYRQRKTLT
VFLATPPWDL TPGETVALKL QVRSVHGIRH LSWQGDTQAL SLTAGTDTRS TEGWTIIMPA
WDHREGAANR WRLSVVVEDE KGQRVSSNEI TLALTEPFIT MPDDNPHWQP FQEQ