Gene SeHA_C0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0913 
Symbol 
ID6490461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp898588 
End bp899871 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content57% 
IMG OID642741161 
Productputative pectinesterase 
Protein accessionYP_002044814 
Protein GI194448441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4677] Pectin methylesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.780035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACAT TATCGGTTTC CCGTCTGGCG CTGGCACTGG CTTTTGGCGT GACGCTGAGC 
GCCTGTAGCT CTACGCCACC CGATCAGATC CCTTCCGATC AAACCGCGCC TGGCACCGCC 
TCGCGCCCAA TTCTGTCGGC AAATGAAGCG AAAAACTTCG TTGCGGCGCG CTATTTTGCC 
TCCCTGACGC CAAATACCGC CCCGTGGTCG CCGTCGCCGA TTACCCTGCC CGCACAGCCT 
GACTTTGTGG TGGGGCCGGC AGGTACGCCA GGCGTTACGC ACACCTCGAT TCAGGCCGCG 
GTCGATGCGG CAATGGTTAA ACGCACGAAC AAACGCCAGT ACATTGCTAT TATGCCGGGC 
GACTATCAGG GGACCGTGTA TGTTCCCGCC GCGCCGGGAA GTCTGACCCT GTACGGGACC 
GGTGAAAAAC CGATCGATGT GAAAATTGGG ATGGCGATTG ATGGTGAAAT GAGCGTCGCT 
GACTGGCGCC GCGCGGTGAA TCCCGGCGGG AAATATATGC CTGGTAAACC CGCCTGGTAT 
ATGTTCGATA ACTGCCAAAG CAAACACGCC GCGACGATCG GTGTGATGTG TTCTGCCGCG 
TTCTGGTCGC AGAATAACGG TCTGCAGCTA CAAAATCTGA CCATCGAGAA CACGCTAGGC 
GACAGCGTCG ATGCCGGAAA CCATCCGGCG GTGGCGTTGC GTACCGATGG CGACAAAGTC 
CAGATTAACA AGGTCAATAT CCTTGGCCGC CAGAACACCT TCTTTGTGAC CAACAGCGGC 
GTGCAGAACC GTCTGCAAAC CGATCGCCAG CCACGTACGC TGGTGACGAA CAGCTATATT 
GAAGGCGATG TGGATATGGT TTCCGGACGC GGCGCCGTGG TGTTCGATAA CACCAACTTC 
CAGGTCGTCA ACTCCCGCAC ACAGCAGGAA GCCTACGTCT TCGCCCCGGC GACGCTGTCC 
AATATTTACT ATGGCTTTTT GGCGATCAAC AGCCGCTTTA ACGCCTCCGG CGATGGCGTT 
GCGCAGCTTG GCCGCTCGCT GGATGTCGAC GCCAACACCA ACGGTCAGGT CGTGATCCGC 
GACAGCGTGA TTAACGAGGG CTTCAACGTT GCCAAACCGT GGGCCGACGC GGTCATCTCG 
AAACGTCCGT TTGCTGGAAA TACGGGAACC GTGGATGACA AAGACGAGGT GCAGCGTAAT 
CTGAACGACA CTAACTACAA CCGCATGTGG GAATACAACA ACCGCGGTAT AGGCAGTAAA 
GTAGTGGCGG AACCTAAGCA GTAA
 
Protein sequence
MNTLSVSRLA LALAFGVTLS ACSSTPPDQI PSDQTAPGTA SRPILSANEA KNFVAARYFA 
SLTPNTAPWS PSPITLPAQP DFVVGPAGTP GVTHTSIQAA VDAAMVKRTN KRQYIAIMPG 
DYQGTVYVPA APGSLTLYGT GEKPIDVKIG MAIDGEMSVA DWRRAVNPGG KYMPGKPAWY 
MFDNCQSKHA ATIGVMCSAA FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 
QINKVNILGR QNTFFVTNSG VQNRLQTDRQ PRTLVTNSYI EGDVDMVSGR GAVVFDNTNF 
QVVNSRTQQE AYVFAPATLS NIYYGFLAIN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 
DSVINEGFNV AKPWADAVIS KRPFAGNTGT VDDKDEVQRN LNDTNYNRMW EYNNRGIGSK 
VVAEPKQ