Gene SeHA_C0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0307 
Symbol 
ID6488849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp316389 
End bp316883 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID642740584 
Producttype VI secretion system lysozyme-related protein 
Protein accessionYP_002044252 
Protein GI194448005 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CTCGTTTTAC ACCCGCTAAC CACCTGCTGC CTACGCTGTT TGATCGGCTG 
TGTGACAATG CTCCGTATCA GAAAATTGAC CGGGATATCA GCGTCACGCC GGTACAACTG
AAGGAGATCA TTCGTCGGGA TCTCTCCTTT TTGCTCAATA CCATTAGCCA CGAGGGTGAC
ATCGACGCCC GGCGCTATCC GCAGGCGGCG GCGTCAGTGC TCAACTATGG TCTGCCGCCG
CTGGCGGGCA GCTTTATGTA TGAGCACAAG TGGGACGATA TCAGCGAGGC GATCCGGCGC
GCCATTATCC GTTTCGAACC CCGGCTGAAC GCCGCCACAC TCAGGGTCAC GCCCTTGCTC
GATGAAGCCC GGCAGGGTAG CTATAACACG CTACAGTTTG AAATTCGCGG ACAAATTCTG
ACGCAGCCGT ATCCCACGGA GTTTCTGGTA CGCAGCGCGC TGGATATGGA GCTGAGCCGC
ATTACGTTCT TTTAA
 
Protein sequence
MSTSRFTPAN HLLPTLFDRL CDNAPYQKID RDISVTPVQL KEIIRRDLSF LLNTISHEGD 
IDARRYPQAA ASVLNYGLPP LAGSFMYEHK WDDISEAIRR AIIRFEPRLN AATLRVTPLL
DEARQGSYNT LQFEIRGQIL TQPYPTEFLV RSALDMELSR ITFF