Gene SeHA_C0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0279 
Symbol 
ID6490250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp289421 
End bp290122 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content55% 
IMG OID642740557 
Productlipoprotein involved with copper homeostasis and adhesion 
Protein accessionYP_002044231 
Protein GI194448692 
COG category[M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism 
COG ID[COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.469251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.756281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGAA CAGCAATATT GTCAGTAGCG GCAGCCTGTA CGCTATTTGC ATTGATAGGG 
TGTAATAACC GTGCGGAAGT TGACGCCCTG CAACCTGCGC AGGCGGCGGA ATTAAAACCC
ATGCAGCAAA GCTGGCGCGG CGTGCTGCCC TGTGCGGATT GTGAAGGTAT TGAAACGTCA
CTGTTTCTGG AAAAAGACGG CACATGGGTG ATGAACGAGC GCTATCAGGG CGTGCGCGAA
GAACCTTCCT CTTTTGCGTC ATACGGTACC TGGGCGCGGA CGGCGGATAA ACTGGTGTTA
ACCGACAGCA ATGGCGAGAA ATCGTATTAT CGCGCGAAAG GCAATGAGCT GGAGATGCTC
GACAGAGAAG GCAATCCGGT GGCTTCGCAG CTTAATTATA CGCTTGTGCC TGTTACCGCC
AGCCTGCCGG TAACGCCAAT GCCGCTGCGT GGTATGTATG TATACAGGGC CGATGCGGCG
ACCTTTACCG ATTGCGCGAC CGGAAAACGG CTGCCGGTCG CCAGTAACGC CCAGCTTGAG
CGCGGCTATC TGGCGGCGAA AGGTGAAGCG GAAAAACCGG TGCTGCTGAC GGTAGAAGGG
CATTTTGTGT TAGCCGCGAA TCCGGACACG GGCGAGCCGG TAAAAACGCT AATAGCTGAT
AAAAATGTGA AGTTTGCGCC GGGTAAAGAT TGCACTCACT AA
 
Protein sequence
MVRTAILSVA AACTLFALIG CNNRAEVDAL QPAQAAELKP MQQSWRGVLP CADCEGIETS 
LFLEKDGTWV MNERYQGVRE EPSSFASYGT WARTADKLVL TDSNGEKSYY RAKGNELEML
DREGNPVASQ LNYTLVPVTA SLPVTPMPLR GMYVYRADAA TFTDCATGKR LPVASNAQLE
RGYLAAKGEA EKPVLLTVEG HFVLAANPDT GEPVKTLIAD KNVKFAPGKD CTH