| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4915 |
|---|
| Symbol | iadA |
|---|
| ID | 6873463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4750980 |
|---|
| End bp | 4752152 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642787791 |
|---|
| Product | isoaspartyl dipeptidase |
|---|
| Protein accession | YP_002218384 |
|---|
| Protein GI | 198243912 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR01975] isoaspartyl dipeptidase IadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.518108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.325437 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT TATCCGCCGC GGAGTTTACC TTATTACAGG GTGCGCACCT GTTTGCGCCA
GAAGACCGGG GCATCTGCGA TGTTCTACTC GCGAATGGCA AAATTATTGC CGTCGGCGCT
GACATCCCCG GCGATATCGT ACCGGACTGT GCGGTGATTA ATCTTAGCGG TCGTATGCTG
TGCCCGGGCT TTATCGACCA ACACGTTCAT CTGATCGGCG GCGGCGGCGA AGCGGGGCCG
ACGACGCGGA CGCCGGAAGT CTCCCTGAGC CGCCTGACGG AAGCCGGGAT AACAACGGTC
GTCGGCCTGC TTGGCACCGA CTCCGTCAGC CGTCATCCCG CGTCGCTGTT AGCCAAAACG
CGAGCGCTAA ATGAGGAGGG GATCACCGCC TGGATGCTCA CGGGCGCTTA TCACGTTCCG
TCGCCGACCA TTACTGGCTC GGTAGAAAAA GACGTCGCGC TGATCGACCG CGTCATTGGC
GTGAAATGCG CAGTCTCCGA CCACCGTTCC GCCGCGCCCA GCGGGAATCA ACTCGCCAGC
ATGGCCGCTG AATCACGCGT TGGCGGCCTG CTGGGCGGCA AACCCGGTGT CAGCGTTTTT
CATATGGGCA GCAGCAAAAA AGGGTTACAG CCGCTGTATG ACATCCTGGA AAACAGCGAC
GTGCCAATCG GTAAACTGCT GCCTACCCAC GTCAACCGTA GCGAATCGCT TTTCGAGCAG
GCGCTGGCGT TTGCGCTTAA AGGCGGCGTA ATCGACATGA CCACCAGTAT CCCGGATCCC
GTCGCGCCGG CGGAGGGCAT TGCCAGAGCG GTAAAAGCCG GCGTCCCGCT TTCCCGGGTG
ACGCTCAGTT CAGACGGCAA CGGCAGCCAG CCGCTATTTG ACGCTGCCGG AAATCTGACG
GGCATCGGCG TCGCGGGCTT CGAAAGTTTG CTGGAGACGT TGCAGACGCT GGTTAACCAC
TACGGATTCA GCCTGACCGA TGCTCTGCGT CCGCTGACGA CCAGCGTAGC CGCCTTCCTC
AGTCTGGACG GCAAAGGCGA AATCCGTCCC GGTAACGATG CGGATCTGCT TGTCTTTAGC
GCAGATTTAC GCATTGAGCA GGTGTATGCG CGCGGCAAAC GCATGGTCAA TGAGGGGAAA
GCCTGCGTAA AAGGTACCTT TGAACCGGCG TAA
|
|---|
| Protein sequence | MPDLSAAEFT LLQGAHLFAP EDRGICDVLL ANGKIIAVGA DIPGDIVPDC AVINLSGRML
CPGFIDQHVH LIGGGGEAGP TTRTPEVSLS RLTEAGITTV VGLLGTDSVS RHPASLLAKT
RALNEEGITA WMLTGAYHVP SPTITGSVEK DVALIDRVIG VKCAVSDHRS AAPSGNQLAS
MAAESRVGGL LGGKPGVSVF HMGSSKKGLQ PLYDILENSD VPIGKLLPTH VNRSESLFEQ
ALAFALKGGV IDMTTSIPDP VAPAEGIARA VKAGVPLSRV TLSSDGNGSQ PLFDAAGNLT
GIGVAGFESL LETLQTLVNH YGFSLTDALR PLTTSVAAFL SLDGKGEIRP GNDADLLVFS
ADLRIEQVYA RGKRMVNEGK ACVKGTFEPA
|
|---|
| |