Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4440 |
Symbol | rhaD |
ID | 6871310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4282033 |
End bp | 4282860 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787358 |
Product | rhamnulose-1-phosphate aldolase |
Protein accession | YP_002217969 |
Protein GI | 198243956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATA TTACCGATTC CTGGTTTGTC CAGGGCATGA TTAAAGCCAC ATCTGATGCG TGGCTGAAAG GGTGGGACGA ACGTAATGGC GGTAACCTGA CGCTGCGTCT GGATGAAGCC GATATCGCGC CTTTTGCGAC TAATTTCCAC GAAAAACCAC GCTATATCGC GCTAAGTCAA CCCATGCCGC TGCTGGCGAA TACGCCGTTT ATCGTTACCG GTTCCGGCAA ATTCTTCCGC AACGTGCAGC TCGATCCGGC AGCCAATTTA GGCGTGGTCA AAATCGACAG CGACGGCGCA GGCTACCACA TTCTGTGGGG CTTAACCCAC GACGCGGTAC CCACCTCTGA ACTCCCGGCG CATTTCCTCT CCCACTGCGA ACGCATCAAA GCCACCCACG GCAAAGACCG CGTCATTATG CATTGCCATG CGACTAACCT GATCGCCCTC ACCTACGTAC TGGAAAACAA CACTGCGCTG ATCACCCGCA AACTGTGGGA AGGCAGCACC GAATGCCTGG TGGTATTCCC GGACGGTGTC GGCATTCTGC CGTGGATGGT GCCAGGCACC GATGAAATCG GCCAGGCTAC CGCGCAAGAA ATGCAGAAAC ATTCGCTGGT ACTGTGGCCG TTCCACGGCG TGTTCGGAAG CGGACCTACG CTGGATGAAA CCTTCGGTTT GATAGATACC GCAGAGAAAT CCGCTGAGGT ATTAGTCAAA ATCTATTCGA TGGGCGGTAT GAAGCAGACC ATCACGCGCG AAGAACTGGT CGCACTCGGC AAACGTTTTG GTGTGACGCC GCTGGCCAGC GCCGTAGCGC TGTACTGA
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Protein sequence | MQNITDSWFV QGMIKATSDA WLKGWDERNG GNLTLRLDEA DIAPFATNFH EKPRYIALSQ PMPLLANTPF IVTGSGKFFR NVQLDPAANL GVVKIDSDGA GYHILWGLTH DAVPTSELPA HFLSHCERIK ATHGKDRVIM HCHATNLIAL TYVLENNTAL ITRKLWEGST ECLVVFPDGV GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAEVLVK IYSMGGMKQT ITREELVALG KRFGVTPLAS AVALY
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