Gene SeD_A4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4165 
Symbol 
ID6874800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4010717 
End bp4011142 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID642787102 
ProductPTS system fructose transporter subunit IIA 
Protein accessionYP_002217728 
Protein GI198246138 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.315728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTACCA CACAACCGTT GCCCCACATC CTGCTGCTGA CGCATGGCGG CTGGGGACAA 
CCGCTTTGCA ACAGCCTGCG TATGGTCACG GGCGAAATTA AAGGCGTGAC GGAAATCGCG
CTAATGCCTG TCGATACGCT GGGCGAGTTT TATCAACGCG TCGAGGCCGT GGTGAAAACG
CTGCCGGAAG GCTCGCTGAT CCTGACGGAT TTTGTCGGCG GCACAACGTC CAACGTCGCG
GCGCGGCTAA GCGCCGATTA TCCGGTGGCG GTGATTGCCG GACTGAATGC GTCGCTACTG
CTGGAGGCGC TGGACAGGCG CGAACAAGGG ATGCTAACCG CCTGCGTGGA TGAGTTAGTT
GAGGCCGGGC GCAGTAGCTG CCTGGATGTG GTCGCCCATG TACGTCAGCT ACAACAATCA
CTCTAA
 
Protein sequence
MTTTQPLPHI LLLTHGGWGQ PLCNSLRMVT GEIKGVTEIA LMPVDTLGEF YQRVEAVVKT 
LPEGSLILTD FVGGTTSNVA ARLSADYPVA VIAGLNASLL LEALDRREQG MLTACVDELV
EAGRSSCLDV VAHVRQLQQS L