Gene SeD_A2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2928 
Symbol 
ID6874731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2818615 
End bp2819892 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content55% 
IMG OID642785969 
Productstationary phase inducible protein CsiE 
Protein accessionYP_002216619 
Protein GI198243019 
COG category[K] Transcription 
COG ID[COG3711] Transcriptional antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGA CAATTGCCCC ACCATCTGTA CTTTCCGCTC CCCAGCGCCG CTGTCAGGTA 
TTGCTGACGC TTTTCCAGCC GGAGCCAATT GCCACGGTGG AAATCTTCAG CGCGCTTAAT 
GGCGTTGATG ATGATACTGC CCGTGAGGAT ATCACTGAGA CAAGCCTGGA GATCCAGCGC 
TATCATCGCC TTGCCATCAC AACATGCCAG AACGGTTGCT ATCGGATCGA AGGTACAGCA 
CTCGATCAGC GCCTTTGCCT TTTACACTGG CTCAGGCGCG GCCTGCGTTT ATGCCCGACC 
TTCGTCACGC AACAGTTTAC CCCGGCCTTA AAAAACGCGC TAAAGCAGCG CGGTATCGCG 
CGTCCGCTGT ATGACGATAT TAATCTGCAC GCGCTCATCA ATCTGTGCGC CCGCCGGTTG 
CAAAAACCAT TTGAACATCG CGACGTGCAG TTCCTGCGTC TCTTTTTACA GTATTGTCTG 
CTACAACACC ATGCCGGCAT CACCCCGGAA TTCAACCCTG TGCAGCAGAT TTGGGCGCAG 
TCGTGCGCGG AATATCCACT CGCCCAGGAA ATTGGTCGTC ACTGGCAGCG CCACGTGATG 
CAGGCCGCAC CGCTCAATGA AGCGCTGTTT ATGGCGTTAC TGTTTTCAAT GATTCGCCTC 
CCCGACCCGA TTCGCGACAC GCATCAACGG GCGCAGCAAC TGCGACTGGA GGTGGCGCGG 
CTGGTGCTGC GCTTTCGAGA AAAAGGGAAC GTACGCTTCA GCGACGAACA AGGGCTTAAC 
GATCAGCTGT ATGTCCATCT CGCCCAGGCG CTGAACCGAA GTTTATTCAC GATTGGCATC 
GATAATACGC TTCCGGAAGA GTTCAACCGT CTTTATCCGC GTCTGGTTCG CACCACACGT 
GAGGCGCTCG CCGGGTTTGA AGCCGAATAT GGTATCCACT TTTCCGAGGA AGAGACGGGG 
CTGGTGGCAG TGATTTTCGT CGCCTGGCTA ATGCAGGATA ACGATTTGCA TGAGAGACAG 
ATCGTATTGT TAGCGGATAA AAATGATGCG CTGGAGACGC ATATTGAGCA GCAACTGCGT 
GAACTGACCC TGTTGCCGCT GAATATCAGA CGGCTATCGC TCCAGGCATT TCAAAAAGAG 
GGATGCCCGC GCGGCGTAGC GCTGATTGTT ACCCCTTACG CCACGCCGCT ACCGCTCTTC 
TCACCGCCAT TAATTCATGC GGATCGCACC CTCACAGAGC ACCAACAGCA GCAGATCCGC 
AAGATCCTGG AATCATGA
 
Protein sequence
MMPTIAPPSV LSAPQRRCQV LLTLFQPEPI ATVEIFSALN GVDDDTARED ITETSLEIQR 
YHRLAITTCQ NGCYRIEGTA LDQRLCLLHW LRRGLRLCPT FVTQQFTPAL KNALKQRGIA 
RPLYDDINLH ALINLCARRL QKPFEHRDVQ FLRLFLQYCL LQHHAGITPE FNPVQQIWAQ 
SCAEYPLAQE IGRHWQRHVM QAAPLNEALF MALLFSMIRL PDPIRDTHQR AQQLRLEVAR 
LVLRFREKGN VRFSDEQGLN DQLYVHLAQA LNRSLFTIGI DNTLPEEFNR LYPRLVRTTR 
EALAGFEAEY GIHFSEEETG LVAVIFVAWL MQDNDLHERQ IVLLADKNDA LETHIEQQLR 
ELTLLPLNIR RLSLQAFQKE GCPRGVALIV TPYATPLPLF SPPLIHADRT LTEHQQQQIR 
KILES