Gene SeD_A2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2278 
Symbol 
ID6872372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2171282 
End bp2172034 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID642785376 
Productantitermination protein 
Protein accessionYP_002216038 
Protein GI198242728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0140366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value2.0380900000000002e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTTG AAGCCTTACC AAAATATTAC TCACCAAAAT CTCCAAAATT GAGCGATGAC 
GCTCCGGCGA CAGCCTCCGA ATCTTTGACG ATTACGGATG TAATGGCGGC GCAGGGGATG 
GTGCAGTCGA AAGCACCACT GGGTTTTGCC TTATTCCTGG CAAAAGTTGG TATTCAGAAT 
CCTGACTTCG CGATTGAAGG GCTGATTCAT TACGCGGTGG CACTGGATAA CCCGACACTG 
AATAAGTTGA GTGAAGAAAC TGGGTTACAG ATTGTTCCTT ACCTCGTGAA TTTTGCATTT 
GCTGATTATT CCAGATCTGC TGCAAGCAAG GCTCGCTGTG AGCATTGTGC TGGTACGGGA 
TTTCATCATG TATTACGTGA AGTGGTGAAA CACTCCAGAA ATGGTGAACC CGTCATCAAA 
GAGGAGTGGG AGAAGGAACT ATGTCAGCAT TGTCATGGTA AGGGAGAAGT CAGCACGGTG 
TGCAGAGGGT GTAAGGGTAA AGGTATTGTC TTGGATGAAA AAAGAACTCG GCTTCATGGC 
GCGCCTGTTT ATAAGATTTG TGGGCGTTGC AATGGAAACC GGTTTAGCCG TTTACCAACC 
ACACTGGCGC GGCATCATGT CCAGAAGCTG GTACCAGACC TGACTGATTA TCAGTGGTAC 
AAAGGATATG CAGATGTCAT TGATAAACTG GTGACAAAGT GCTGGCAGGA AGAAGCATAT 
GCTGAGGCGC AATTAAGAAA AGTCACGAGA TAA
 
Protein sequence
MNLEALPKYY SPKSPKLSDD APATASESLT ITDVMAAQGM VQSKAPLGFA LFLAKVGIQN 
PDFAIEGLIH YAVALDNPTL NKLSEETGLQ IVPYLVNFAF ADYSRSAASK ARCEHCAGTG 
FHHVLREVVK HSRNGEPVIK EEWEKELCQH CHGKGEVSTV CRGCKGKGIV LDEKRTRLHG 
APVYKICGRC NGNRFSRLPT TLARHHVQKL VPDLTDYQWY KGYADVIDKL VTKCWQEEAY 
AEAQLRKVTR