Gene SeD_A2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2016 
Symbol 
ID6875354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1949549 
End bp1950508 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content48% 
IMG OID642785130 
Productputative outer membrane protein 
Protein accessionYP_002215796 
Protein GI198245612 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0652398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAAT ACAGCTATTG CGCAACGATG ATTGCCGCCA TACTCAGTAC GACCACAATG 
GCCAATGCCA GTAGCCTTGC TATTTCAGTG GCGAATGATG ATGCAGGTAT ATTTCAACCA 
TCCTTAAATG CCCTTTATGG GCACCCGGCT GCAGACCGGG GTGATTATAC TGCCGGGCTC 
TTTTTAGGCT ACAGCCACGA TCTCACTGAC GCCAGTCAAC TCTCTTTTCA TATCGCGCAA 
GATATTTATT CTCCATCAGG CGCCAATAAG AGAAAGCCTG AAGCCGTCAA AGGCGACCGC 
GCGTTCAGCG CCTTTCTTCA TACCGGACTG GAGTGGAATT CATTAGCCAC CAATTGGTTA 
CGTTATCGTT TAGGTACCGA TATCGGCGTT ATTGGTCCTG ACGCAGGCGG TCAGGAGGTT 
CAGAATCGGG CGCATCGAAT AATAGGCGCA GAAAAATACC CTGCCTGGCA GGATCAAATT 
GAAAACCGTT ATGGTTACAC GGCAAAAGGA ATGGTCTCCC TTACGCCAGC TATTGATATT 
CTGGGTGTCA ATGTGGGCTT CTATCCAGAA GTCTCTGCTG TCGGCGGCAA TCTCTTCCAG 
TATTTGGGGT ACGGCGCAAC CGTTGCGCTG GGAAATGATA AGACCTTCAA CTCTGATAAT 
GGGTTTGGGT TATTGTCCCG CCGAGGGTTA ATACACACTC AAAAAGAGGG ATTGATCTAT 
AAAGTATTTG CTGGCGTTGA GCGCAGGGAA GTTGATAAAA ACTACACGTT ACAGGGGAAA 
ACGCTGCAAA CAAAAATGGA AACGGTGGAT ATTAATAAAA CCGTGGATGA ATATCGCGTC 
GGTGCCACCA TCGGCTATTC TCCCGTCGCA TTTTCTCTTT CTTTAAACAA AGTCACGTCG 
GAATTTCGCA CCGGAGACGA CTATTCTTAT ATCAACGGAG ACATCACCTT CTTCTTCTGA
 
Protein sequence
MNKYSYCATM IAAILSTTTM ANASSLAISV ANDDAGIFQP SLNALYGHPA ADRGDYTAGL 
FLGYSHDLTD ASQLSFHIAQ DIYSPSGANK RKPEAVKGDR AFSAFLHTGL EWNSLATNWL 
RYRLGTDIGV IGPDAGGQEV QNRAHRIIGA EKYPAWQDQI ENRYGYTAKG MVSLTPAIDI 
LGVNVGFYPE VSAVGGNLFQ YLGYGATVAL GNDKTFNSDN GFGLLSRRGL IHTQKEGLIY 
KVFAGVERRE VDKNYTLQGK TLQTKMETVD INKTVDEYRV GATIGYSPVA FSLSLNKVTS 
EFRTGDDYSY INGDITFFF