Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1724 |
Symbol | |
ID | 6875089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1661182 |
End bp | 1661979 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642784861 |
Product | putative regulatory protein |
Protein accession | YP_002215529 |
Protein GI | 198243136 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.8346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.195936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATGA GCCAACAGCG CCCCGACCGT ATCAAACAGA TGTTGCATTA CCTTTGGCAA CACAGGCACC TCTCAACACA ACAAGCTATT GAGCTTTTTG GCTATGCAGA GGCAACCGTG CGCCGGGATT TTCACTATAT TGCCAGCCGT TATCCCGGTA TGGTTCGCGG CCATGGTTGT ATTGACTTCG ACGACAGTAC GGAAGATAAA GAATATGTTT TCGACGTTAA GCGAACGTTA CAAAGCGAGG CGAAACGCGA AATCGCCGCC CTCGCCCGCA CGTTCATCAA GGATGGAGAC TGCTTTTTTC TCGACTCCGG CTCCACCTGT CTGGAACTGG CAAAATGTCT GGTCGACGCC AAAGTAAAAG TCATTTGCAA TGACATCAAA ATCGCTAACG AACTGGGTGG CTTCCCACAC GTAGAGAGCT ACATTATTGG CGGACTGATT CGCCCCGGTT ACTTTTCGGT GGGCGAGAGT CTGGCGCTGG AGATGATTAA CGCCTTTGCC GTTGAACGCG CCTTTATCTC CTGCGATGCG CTGTCGATTG AAACGGGCAT CACCAACGCT ACCATGTTTG AAGTAGGCGT CAAAACGCGC ATTATTCAGC GCTCACGCGA GGTCATATTG ATGGCCGATC ACTCAAAGTT TGATACTGTA GAACCCCATG CGGTGGCGAC GCTGTCCTGT ATTACTACCA TTCTTAGCGA CAGTGCGCTC CCGTCTGCTA TCGCCCGACG TTATCAGCAG GCGGGATGCC GTCTCATCAT GTCAGACCCC TCATCAGGAG CGCGCTAA
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Protein sequence | MLMSQQRPDR IKQMLHYLWQ HRHLSTQQAI ELFGYAEATV RRDFHYIASR YPGMVRGHGC IDFDDSTEDK EYVFDVKRTL QSEAKREIAA LARTFIKDGD CFFLDSGSTC LELAKCLVDA KVKVICNDIK IANELGGFPH VESYIIGGLI RPGYFSVGES LALEMINAFA VERAFISCDA LSIETGITNA TMFEVGVKTR IIQRSREVIL MADHSKFDTV EPHAVATLSC ITTILSDSAL PSAIARRYQQ AGCRLIMSDP SSGAR
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