Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1705 |
Symbol | |
ID | 6873046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1642545 |
End bp | 1643276 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642784845 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_002215513 |
Protein GI | 198244296 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.113372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.00997988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTAC TGAAACTAAA AGAGATAAGT AAGGAATATT CAGGAAAAAA GGTTCTTGAT ACGGTTAGTC TGAAAATTCA ATCGGGAGAC ATGAAAGTAG TCATGGGGCC ATCAGGTTGT GGAAAAACGA CGCTTTTACG CTGTCTGCTT CGATTAGAAG AACCTGATTA TGGCAATATT TATTTTCACG GGAAAAATAT TTACGACAAA GAATTTACTA TTCTTGAGTT CAGAAAAAAA GTTGGTTGTG TCTTCCAGAA TTACGCTTTG TATCGCCATC TTAACGTCAT GGATAATATT ACCCTTGCCC TATGTAAAGT GTTTGGCATG CCGGGACAAC TAGCCCGGGA GAAAGCCTTA CATGAGCTAC AAAAACTTGA TATGGCCTCG CATAGCGCGA AATACCCTTC GCAATTATCG GGCGGCCAGC AACAGCGCGT CGCCCTGGCC CGTACAATGG TCACCGACCC AGAACTCATT ATTTTTGATG AGCCGACGTC TGCGCTTGAT CCGCTCATGA CTCGTGAAGT CGGAATGTTG ATCAAGCAAC TTCACGACAA TGGCGTCACT ATATTATGCG TCACTCATGA TATTCGCCTC GCCAGATTAC TAAGCGATAA CGTAACGTTT CTTAATCATG GCAAGATTCG TGCAGAAGGC GCTTTTACCG ATCTTGCCTT ACGAGAAACG GATCCAGATA TCCACTGTTT TTTTAGCGAG GCACAACGAT GA
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Protein sequence | MALLKLKEIS KEYSGKKVLD TVSLKIQSGD MKVVMGPSGC GKTTLLRCLL RLEEPDYGNI YFHGKNIYDK EFTILEFRKK VGCVFQNYAL YRHLNVMDNI TLALCKVFGM PGQLAREKAL HELQKLDMAS HSAKYPSQLS GGQQQRVALA RTMVTDPELI IFDEPTSALD PLMTREVGML IKQLHDNGVT ILCVTHDIRL ARLLSDNVTF LNHGKIRAEG AFTDLALRET DPDIHCFFSE AQR
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