Gene SeD_A1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1703 
Symbol 
ID6872618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1640181 
End bp1641731 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content44% 
IMG OID642784843 
Productputative inner membrane protein 
Protein accessionYP_002215511 
Protein GI198243075 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0134894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00223393 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCTAC CACAACTATC AATATGGCAG CCCGGCGATG GGTTAAGAAA AATAAAGTAT 
AAATATCATG TTTGTCTCAT TGTCATATTC TCCGTCCTTA TACGGTTGCT GTTTTTAACT 
GACCGCTACC TTTGGTGTGA CGAAGCGTCC AGCGTGCTGA TTAGTCGACA TAGCGTAGAT 
AATCTGCTAT TCCATACCGC TTTTGACGTG CATCCCCCGC TTTATTATCT GTTACTGCAT 
GACTGGATCA TATTATTGGG TGATAGCATT GCAGCGGTAC GCTCTCTCAG TCTACTCTTT 
GGGATCCTGA CAGTTGTGCT GGTTATCGCG CTTACGCGAT GGCTGGCAAA TGAACGTACA 
GCCTTATTGG CGGGATGGTT CGCCGCCCTG ATGCCGATGG CAGTTCATTA CAGTCAAGAA 
ACGCGCATGT ACGCGTTAAT GGGAATGCTA ACGCTCGCTG CCGCGTTAGC ATTGATGATG 
TGGATAAAAA CACCCACCCA TAATCGCTAT CTTATCGCGT ATGCTTTACT TATGACGTTC 
AGCTTTTACA CCCATTATTT CACCCTATTT ACACTTATTG CCCACTGGAT CGCAGTAACA 
ATATTATCCT GCCAAAGCCA TAAAACGGCC TGCTACCTTA AACTTCCTGG CTGGTGGTTT 
GCTAACCTGG CGATTGCTGT CGCTTATCTC CCCTGGTTGC CCGTATTGTT TAATTTACTG 
ACTCATCTGG CGCAGTTGAG AGCCGGTAAT AATATCGGTT GGATTCCCCC CGTAACATGG 
CGTGACCTGC CTGCGATGTA TTGGCATTTT TTTACCGGAA ACAACGGACA GGGTTTTCCG 
TCGTTCATTC TGTGGCTGGC TGTGGGAGGT TTTATCGGTA CTGTGGGGCG AATATCTTTA 
TGCAACGGAG AATATGAAAG ATATCAGCTG ATATTATTTT GTAATCTGGT CATCCCTGTA 
ATGCTGGTCT TAATCATTTC CTGGTGGATG CCGTTATTTA TCGATCGTTA TTTCTTCTTC 
TCATCGCTGA GCATTCCTCC CCTGCTCGCG GTATTACTTA CCCGCGCAAA AAAAGCGGTT 
TGTGGCTTCT GGTTTATCTT ATTCACCTTA TTATTCGGCT ATGGTTCATA TCATAATAAC 
CCTGAGCACA TAGACGAGTT TAAACCACTG GTAAACTATA TTAATACCCG TCACCAGCCT 
AATGATGCCG TGGTAGTCAG TAAAATGTTC GATTATTTAA GTTATGTGTA TTGTAATAAG 
CGAGATTATC GTACGTTTCT TTATACACCG CCTAACGCTC ATGGAACATC AGGCAGACCG 
AATGCCTATG GCTTTGGTTC ACTGTTTTAT GCGCAAGCCG ATCAGACATA TATTGATACT 
CTGACAACGC TTTCAAAAAG TTACCATCGT GTCTGGTTGG TAAGCGGCGG TAACTTTAGT 
CAGGATTATC CCTTGCCGTC AGAATGGCAA AATATCGCAA ACTTCAGAAG TGGTAGATTT 
CAGGTACAGT TATTTGTAAT ACCGACTCAA CAGGCGCGTC AAATGCAATG A
 
Protein sequence
MALPQLSIWQ PGDGLRKIKY KYHVCLIVIF SVLIRLLFLT DRYLWCDEAS SVLISRHSVD 
NLLFHTAFDV HPPLYYLLLH DWIILLGDSI AAVRSLSLLF GILTVVLVIA LTRWLANERT 
ALLAGWFAAL MPMAVHYSQE TRMYALMGML TLAAALALMM WIKTPTHNRY LIAYALLMTF 
SFYTHYFTLF TLIAHWIAVT ILSCQSHKTA CYLKLPGWWF ANLAIAVAYL PWLPVLFNLL 
THLAQLRAGN NIGWIPPVTW RDLPAMYWHF FTGNNGQGFP SFILWLAVGG FIGTVGRISL 
CNGEYERYQL ILFCNLVIPV MLVLIISWWM PLFIDRYFFF SSLSIPPLLA VLLTRAKKAV 
CGFWFILFTL LFGYGSYHNN PEHIDEFKPL VNYINTRHQP NDAVVVSKMF DYLSYVYCNK 
RDYRTFLYTP PNAHGTSGRP NAYGFGSLFY AQADQTYIDT LTTLSKSYHR VWLVSGGNFS 
QDYPLPSEWQ NIANFRSGRF QVQLFVIPTQ QARQMQ