| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1630 |
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| Symbol | rnb |
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| ID | 6871504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1572327 |
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| End bp | 1574261 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642784775 |
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| Product | exoribonuclease II |
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| Protein accession | YP_002215443 |
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| Protein GI | 198243929 |
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| COG category | [K] Transcription |
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| COG ID | [COG4776] Exoribonuclease II |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02062] exoribonuclease II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000000000000100585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCAGG ACAACCCGCT GCTAGCGCAG CTTAAACAGC AACTGCATTC CCAGACGCCG
CGCGCTGAAG GGGTCGTAAA AGCCACGGAA AAAGGCTTTG GCTTCCTTGA GGTTGACGCG
CAAAAAAGCT ATTTCATTCC TCCGCCGCAG ATGAAAAAAG TGATGCATGG CGATCGTATC
GTCGCGGTCA TCCACACGGA AAAAGAACGT GAGTCTGCCG AGCCGGAAGA ACTGATCGAA
CCGTTCCTGA CGCGTTTTGT GGGAAAAGTT CAGGGTAAAA ATGACCGCCT GTCCATCGTG
CCGGATCATC CGTTGCTGAA AGACGCGATT CCCTGCCGCG CCGCGCGCGG CGTTCAGCAT
GAGTTCAAAG AAGGTGACTG GGCGGTTGCC GAAATGCGCC GCCATCCGCT TAAAGGCGAC
CGTTCGTTTT ACGCCGATTT AACGCAGTAC ATCACCTTTG CCGACGATCA CTTTGTTCCC
TGGTGGGTTA CGCTTGCCCG CCATAACCTG GAAAAAGAAG CGCCGAACGG CGTAGCGACG
GAGATGCTGG ACGAAGGGCT GGAGCGTCAG GATCTGACCG CGCTGAATTT CGTCACTATC
GATAGCGCCA GCACTGAAGA TATGGATGAC GCGCTATATG CTGAGGAATT AGCGGACGGC
AGACTCCAGC TTACGGTGGC TATCGCCGAT CCTACCGCCT GGATTGCCGA AGGCAGTAAG
CTGGATAACG CCGCGAAAAT TCGCGCCTTC ACCAACTACC TGCCGGGCTT CAATATTCCT
ATGCTGCCAC GTGAGCTGTC TGACGATCTG TGCTCACTGC GCGCCAACGA AGTGCGTCCG
GCGCTCGCCT GTCGCATGAT AATCTCCGCG GACGGCACCA TTGACGATGA TATCGCCTTT
TTTGCGGCCA CCATCGAATC GAAGGCCAAG CTGGCGTACG ACAATGTCTC CGACTGGCTG
GAAAATAACG GCACCTGGCA GCCGGATAAC GAAGGCATTG CCCAGCAGAT TCGTCTGTTG
CACCGTATTT GCCTAAGCCG CAGTGAGTGG CGTCATCATC ATGCGTTAGT CTTTAAAGAC
CGCCCGGATT ACCGCTTTGT GCTTGGCGAA AAAGGCGAAG TACTGGATAT TGTGGCGGAA
CCGCGCCGTA TCGCTAACCG TATCGTAGAA GAGTCGATGA TCGCCGCTAA CCTTTGCGCC
GCGCGCGTAC TGCGCGATAA GCTCGGTTTC GGTATTTACA ACGTACATAC GGGCTTCGAT
CCCGCGAATG CCGACGCGCT GGCCGCGCTG CTGAAAACGC ATGGTCTGCA TGTCGATGCC
GAAGAGGTGC TGACGCTGGA AGGCTTCTGT AAACTGCGTC GCGAACTGGA TGCGCAGCCC
TCCGGTTTCC TTGACAGCCG CATTCGTCGC TTCCAGTCTT TTGCGGAAAT CAGCACCGAG
CCGGGGCCGC ATTTCGGTCT TGGTCTTGAG GCTTACGCCA CCTGGACCTC TCCTATCCGT
AAGTATGGCG ATATGATTAA CCATCGCCTG CTGAAAGCGG TCATCAAGGG GGAGGCTATT
GCGCGTCCGC AGGAAGATAT CACCCAGCAA ATGGCGGAAC GCCGTCGCCT GAACCGCATG
GCGGAGCGCG ATGTCGGCGA CTGGTTATAT GCACGCTTCC TTAACGATAA GGCGGGGACA
AATACCCGTT TCGCGGCAGA AATTATTGAC GTCAGCCGCG GTGGTATGCG TGTGCGACTG
GTCGATAACG GCGCTATCGC CTTTATCCCT GCCCCGTTCC TGCACGCCGT TCGCGATGAA
CTGGTATGCA GCCAGGAAAA CGGTACGGTA CAGATTAAAG GTGAGACGGT TTATAAAGTG
ACGGATGTCA TTGATGTCAC TATTGCGGAA GTTCGCATGG AAACCCGCAG CATTATTGCC
CGACCGGCAG CGTAA
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| Protein sequence | MFQDNPLLAQ LKQQLHSQTP RAEGVVKATE KGFGFLEVDA QKSYFIPPPQ MKKVMHGDRI
VAVIHTEKER ESAEPEELIE PFLTRFVGKV QGKNDRLSIV PDHPLLKDAI PCRAARGVQH
EFKEGDWAVA EMRRHPLKGD RSFYADLTQY ITFADDHFVP WWVTLARHNL EKEAPNGVAT
EMLDEGLERQ DLTALNFVTI DSASTEDMDD ALYAEELADG RLQLTVAIAD PTAWIAEGSK
LDNAAKIRAF TNYLPGFNIP MLPRELSDDL CSLRANEVRP ALACRMIISA DGTIDDDIAF
FAATIESKAK LAYDNVSDWL ENNGTWQPDN EGIAQQIRLL HRICLSRSEW RHHHALVFKD
RPDYRFVLGE KGEVLDIVAE PRRIANRIVE ESMIAANLCA ARVLRDKLGF GIYNVHTGFD
PANADALAAL LKTHGLHVDA EEVLTLEGFC KLRRELDAQP SGFLDSRIRR FQSFAEISTE
PGPHFGLGLE AYATWTSPIR KYGDMINHRL LKAVIKGEAI ARPQEDITQQ MAERRRLNRM
AERDVGDWLY ARFLNDKAGT NTRFAAEIID VSRGGMRVRL VDNGAIAFIP APFLHAVRDE
LVCSQENGTV QIKGETVYKV TDVIDVTIAE VRMETRSIIA RPAA
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