Gene SeD_A1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1422 
Symbol 
ID6871540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1388784 
End bp1389284 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID642784588 
Productbacteriophage lambda tail assembly protein I 
Protein accessionYP_002215258 
Protein GI198242732 
COG category[S] Function unknown 
COG ID[COG4723] Phage-related protein, tail component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.828681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0460602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGG ATACCCTTAC TGCCAGACTG AACGAATCGT TACCGCCGGG GGCAGTGGTT 
CATATTGTAC CGCGTATGGC GGGAGCGAAA AACGGTATCT GGCAGGTGGT AGCCGGGGCA
GCGCTGATTG GCGCGTCATT TATTCCCGGT CTGAATGCTG TAGCGGCGGC AGTATTGTTT
TCCGCAGGAA CCAGTATGGC GCTGGGTGGT GTGGCGCAGA TGCTGACACC TGTACCCAAA
ACACCGACGG TGGGTCAGAC AGATAACGGG AAACAGAACA CGTACTTTTC TTCCCTGGAA
AATATGGTGG CCCAGGGGAA CCCGGTGCCG GTGTTGTACG GTGAAATGAA AATCGGGTCA
CGGGTGATAT CGCAGATGAT GAGTACCCGG GATGAGAGCA CGTCGGGAAA AGTTGTGGTG
ATCGGCTCCC CGTTACAGGC AAACACCACG TCGCGGCAGG ACGGCGGGAT TACCAGACCG
TCTGTCGTCA TCCGGCAGTG A
 
Protein sequence
MAPDTLTARL NESLPPGAVV HIVPRMAGAK NGIWQVVAGA ALIGASFIPG LNAVAAAVLF 
SAGTSMALGG VAQMLTPVPK TPTVGQTDNG KQNTYFSSLE NMVAQGNPVP VLYGEMKIGS
RVISQMMSTR DESTSGKVVV IGSPLQANTT SRQDGGITRP SVVIRQ