| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1000 |
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| Symbol | |
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| ID | 6873638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 989033 |
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| End bp | 990466 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642784185 |
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| Product | NAD dependent epimerase/dehydratase family protein |
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| Protein accession | YP_002214860 |
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| Protein GI | 198243271 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.31559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 104 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAAC GCATTCTGGT TCTCGGCGCC AGCGGCTATA TCGGCCAGCA CCTGGTCTTT
GCGCTAAGTC AGCAAGGGCA TCATGTGCGA GCGGCGGCGC GACGCATCGA ACGTCTGGAA
AAACAGCGCC TCGCCAACGT CAGTTGTCAT AAGGTCGATC TGCACTGGCC GGAAAATTTA
CCCGCGCTGC TTCGCGACAT TGATACCGTT TACTATCTGG TACACGGCAT GGGCGAAGGC
GGCGATTTTA TCGCCCATGA GCGTCAGGCG GCGCTCAACG TGCGCGACGC GCTGCGCCAG
ACGCCGGTTA AACAACTTAT TTTCCTCAGT TCATTGCAGG CGCCGGCACA TGAGCAATCC
GATCACCTGC GCGCCCGCCA GCTTACGGCT GACACGCTGC GCGACGCAGG CGTACCGGTG
ACGGAATTAC GCGCCGGGAT CATCGTCGGC GCAGGCTCCG CCGCCTTCGA AGTCATGCGT
GACATGGTTT ACAACCTGCC AATACTCACG CCGCCGCGCT GGGTGCGTTC GCGCACCACG
CCCATCGCTC TGGAAAATTT ACTCTACTAC CTGGTCGGCT TGCTGGACCA CCCTGCGCAC
GAGCATCGTA TTCTGGAAGC CGCCGGGCCG CAGGTATTAA GCTATCAGCA GCAGTTTGAA
CGTTTTATGG CCGTCAGCGG TAAACGGCGT CCGCTGATCC CGGTGCCTTT TCCGACCCGC
TGGATTTCGG TCTGGTTTTT AAACGTTATT ACCTCCGTGC CGCCGACTAC CGCAAAAGCC
TTAATCCAGG GGTTAAGGCA CGATTTGCTG GCCGATGACG CCGCGTTAAA AAAGTTGATC
CCCCAAACGC TTATCACCTT TGACGACGCC GTTCGCCGCA CGCTGAAAGA AGAAGAAAAA
CTGGTGAACT CCAGCGACTG GGGCTACGAC GCGCTGGCCT TCGCCCGCTG GCGTCCCGAA
TACGGCTATT TTCCAAAGCA GGCGGGCTTT ACCGCGCAGA CCCCGGCCAG CCTATCGGCG
CTCTGGCAGG TCGTAAATCG GCTGGGTGGC AAAGAGGGCT ATTTTTTCGG CAATATTTTG
TGGCAGACGC GCGCCGCGAT GGACCGTCTG GTGGGGCATA AACTGGCGAA AGGCCGCCCG
TCGCATACCT TGCTCAAGCC TGGCGATACG GTAGATAGCT GGAAAGTGAT CATTGTCGAA
CCAGAAAAAC AGCTCACGCT CTTGTTTGGC ATGAAAGCGC CGGGCCTGGG GCGGCTTAGC
TTCACGCTGC ACGATAAAGG CCGCTACCGC GAAATTGACG TGCGCGCCTG GTGGCATCCA
CACGGAATGC CGGGCCTGAT TTACTGGCTA CTGATGATCC CGGCGCACCT GTTTATTTTC
CGGGGAATGG CAAGGCGTAT TGCCCGACTT GCAGAACAAA TCACAGAAAA ATGA
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| Protein sequence | MAQRILVLGA SGYIGQHLVF ALSQQGHHVR AAARRIERLE KQRLANVSCH KVDLHWPENL
PALLRDIDTV YYLVHGMGEG GDFIAHERQA ALNVRDALRQ TPVKQLIFLS SLQAPAHEQS
DHLRARQLTA DTLRDAGVPV TELRAGIIVG AGSAAFEVMR DMVYNLPILT PPRWVRSRTT
PIALENLLYY LVGLLDHPAH EHRILEAAGP QVLSYQQQFE RFMAVSGKRR PLIPVPFPTR
WISVWFLNVI TSVPPTTAKA LIQGLRHDLL ADDAALKKLI PQTLITFDDA VRRTLKEEEK
LVNSSDWGYD ALAFARWRPE YGYFPKQAGF TAQTPASLSA LWQVVNRLGG KEGYFFGNIL
WQTRAAMDRL VGHKLAKGRP SHTLLKPGDT VDSWKVIIVE PEKQLTLLFG MKAPGLGRLS
FTLHDKGRYR EIDVRAWWHP HGMPGLIYWL LMIPAHLFIF RGMARRIARL AEQITEK
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