Gene SeD_A0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0471 
Symbol 
ID6871074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp486673 
End bp487392 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content58% 
IMG OID642783697 
Product2-aminoethylphosphonate transport, repressor 
Protein accessionYP_002214384 
Protein GI198246156 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR03337] transcriptional regulator protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.481476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA TCCCGGGCGA TATCCCGCAG TACCTGTTGA TCAAGGCACA GCTTCAGGCA 
CGTATTCAGA GCGGTGCGTT GAAAAGCGGT GATAAACTGC CGTCTGAACG CGAACTGTGC
GCGATCTTCA ACACCACGCG CATTACTATT CGCGAAAGTC TGGCACAGCT GGAGTCCAGT
GGGCTTATCT GGCGCGCCGA TCGTCGCGGT TGGTTCGTTA CGCCGGAACG CCTGTGGCTG
GATCCGACCC AGAACACCAA CTTCCATAAG CTTTGCCGCG AGCAGGGGCG GGAGCCAAAA
ACCGCGCTAC TGAGCGGCGT GTTAACCACC GTGCCTATCG AGGTCATGGA GCCCCTCCAG
CTCCAGCCGT TTGATCAAAT CTATCTGCTG ACCCGTCTGC GTTACGCCGA TGGCCGCGCC
GTGTGCTACT GCGAAAACCA TTGTTTGCCC GCCCGCGTGC CTGAGCTGCT GCAGTACGAT
CTCAACGGCA GCCTGACCGA GGTATACGAG TCGCACTACA ACCTCGTCTA TACCAGCATG
CATCTGTCGT TCTACCCCAC CGCCATGCCT GCGCAGGCCG CACAGGCGCT GGGAGTTATG
GAAGGACGCC CGGCGCTGTT ACTGCGCCGC CTGAACTACG ATCAACACGG GCGAGTGCTG
GATCTGGATA TCGAATACTG GCGTCACGAC AGCCTGCGTA TTGAGGTAGA TACCCACTAG
 
Protein sequence
MKSIPGDIPQ YLLIKAQLQA RIQSGALKSG DKLPSERELC AIFNTTRITI RESLAQLESS 
GLIWRADRRG WFVTPERLWL DPTQNTNFHK LCREQGREPK TALLSGVLTT VPIEVMEPLQ
LQPFDQIYLL TRLRYADGRA VCYCENHCLP ARVPELLQYD LNGSLTEVYE SHYNLVYTSM
HLSFYPTAMP AQAAQALGVM EGRPALLLRR LNYDQHGRVL DLDIEYWRHD SLRIEVDTH