Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4814 |
Symbol | |
ID | 6792971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4692627 |
End bp | 4693955 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642778879 |
Product | protein HipA |
Protein accession | YP_002149440 |
Protein GI | 197248365 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGAA CACAGCAGCG TTTATCAATA TGGATGAATG GAATCCGGGT CGGATTCTGG GAGAAGGCCA GAGGCGAGGA TTTATTACAA TACCTTCCAG AATGGATAAT TGATGAACAG GGAAGACCTT TATCGCTTTC TTTGCCTTTC ACTCCAGGTA ATCAGCTTTG GCGTGGTAAT GTTGTTCGTG ACTATTTTGA TAATTTATTG CCTGACAGCG AAAGTATACG CAGACGTTTA GCCGTGCGTT ACCAGGCTGA AAGCCTTGAG CCTTTTGATC TATTGGCTGA GCTGGGAAGA GACTGCGTTG GTGCAATACA GTTACTGAAT GTTGATGAAG AGCCCACAGA TTTATTTTCC GTAAATTATC GCCCACTTTC TGAAGCTGAT ATCGCAACTA CATTGCGTAA TACTACGGCG ATATCGTTGC CTGGTCGGCA GGACGAAACT GACGATTTGC GATTATCAAT TGCCGGTGCG CAGGAAAAAA CGGCTTTATT GTGGCATGAA GAACGATGGT GTTTACCTGA AGGTAATACC CCAACAACGC ATATCTTCAA ACTACCGCTT GGGTTGGTTG GGAACATGCA AGCGGATATG AGTACATCGG TTGAAAATGA ATGGCTGTGT TCTTTGCTTG TTGAGCACTA CGGGATCCCT GTAGCAAAAA CACAGATTGC GCAGTTTGAG GATCAGAAGG CATTAGTAGT TGAGCGTTTC GACAGAAGAT GGTCAGGCGA TCGGCAATGG ATCATTCGTT TGCCACAAGA GGATATGTGT CAGGCTTTAG GTGTTTCTCC GTTACGAAAA TACCAGTCTG ATGGTGGGCC GGGTATTTCC GATATTATGG AAATACTGAG TCATTCAGAT CAGGCTGAGC AGGACAAAGA GCAGTTCTTC AGGGCTCAAA TTATTTTCTG GTTGATGGCT GCTACTGACG GCCATGCCAA AAATTTCAGT ATCGCTATTG AGCCACAAAG TCGTTACCAC CTTACGCCTC TTTACGATAT TTTATCAGCA TGGCCGGTAA TTGGTCATGG TAATAATCAG ATTTCCTGGC AAAGATGCAA ACTGGCAATG GCTGTTCGCG GTAGCAGTAA TTATTACCAC ATTTATAGAG TTCAACGACG GCATTGGATT AATCAAGGTG AATTAAACGG ATTGGGAAGA CGACAAGTTG AGTCCATGAT GGATGACATT ATATCCAGCA CACCTGAAGT CATTGAGCGT GTATCTGCGT TGCTTCCAGA GTCGTTTCCA TCTGAGCTTG CTGAGTGTAT TTTTGAAGGT ATGCGGCAGC AGTGTAGGCG TTTGGCTGGA AGGGAATAA
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Protein sequence | MRRTQQRLSI WMNGIRVGFW EKARGEDLLQ YLPEWIIDEQ GRPLSLSLPF TPGNQLWRGN VVRDYFDNLL PDSESIRRRL AVRYQAESLE PFDLLAELGR DCVGAIQLLN VDEEPTDLFS VNYRPLSEAD IATTLRNTTA ISLPGRQDET DDLRLSIAGA QEKTALLWHE ERWCLPEGNT PTTHIFKLPL GLVGNMQADM STSVENEWLC SLLVEHYGIP VAKTQIAQFE DQKALVVERF DRRWSGDRQW IIRLPQEDMC QALGVSPLRK YQSDGGPGIS DIMEILSHSD QAEQDKEQFF RAQIIFWLMA ATDGHAKNFS IAIEPQSRYH LTPLYDILSA WPVIGHGNNQ ISWQRCKLAM AVRGSSNYYH IYRVQRRHWI NQGELNGLGR RQVESMMDDI ISSTPEVIER VSALLPESFP SELAECIFEG MRQQCRRLAG RE
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