| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3661 |
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| Symbol | |
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| ID | 4020218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4377148 |
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| End bp | 4378452 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957722 |
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| Product | sigma-54 factor, interaction region |
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| Protein accession | YP_564659 |
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| Protein GI | 91795008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC TTAAAATACG TTTGGTTGAT TTTACGCTTT CAGTAGCAAC CTTAGAACGA
CTAAAATCCC AAGGATTTAC ACTGTGGCAA CAAGGAAATA CGGTACCTTG GTTGACCATA
ATAAACCTTT CTCAATTTAA GCCGTCTCAA TTGGCGGGGC ATTTGAGTGG TTTCTCAAGT
AAAAACTTCT TGGCATTACT CGCTCCCGAA CAAGGGGAGT TGGCTGCGGC TGCCATGCAG
TCAGGCGTAC AAGACTATTT ACTGCTTCCT GTTGAAGATG AGCAGCTCAT TGCTTCAATT
TCACGTCTAC ATCGCTTGGA GCAACCGGAC CCTAAACTCA TTGTTGCCGC TCCCGTTAGC
CGACAGTTGC TTATGTTAGC TCATAGAGCA GCCACCACTG AGGCCACTGT ACTACTCACG
GGTGAAAGTG GTACAGGTAA AGAGCCGCTG GCCAATTATA TTCATCGTCA TTCAAGTCGC
GCCCACAAGC CTTTTATCGC CATCAATTGC GCTGCTATTC CCGAAACCAT GCTCGAATCT
ATTCTCTTTG GTCACACTAA GGGGGCGTTT ACGGGGGCGA GTAGCGATAA AGCCGGTAAA
TTTGAGCAAG CCAACGGCGG CTCGCTGTTG CTGGATGAAA TTGCTGAAAT GCCGCTGGCT
CTGCAAGCTA AATTACTGCG GGTGCTACAA GAGAGAGAAG TTGAACGTTT AGGTGGCAGT
CAGGCTATTC CCCTCGATAT TAGAGTGATA GCGGCAACCA ATAAAGATTT ACGTCAAGCG
GTTGAAAACG GCACTTTTAG AGAGGACCTT TTCTATCGTT TGGATGTGCT GCCACTAAAA
ATCTTTCCCC TTAGGGACAG AAAAACCGAC ATTTTGCCCT TAGCCGAGCA TTTTTTACAT
CGCTTTGATA CCCAAGGTGT GGAGTGTTAC TTCAGCCGTC AGGCGCGCGA AGCTTTACTG
GCTTACGATT GGCCGGGGAA TGTCCGTGAG CTGGAAAATT GCATTCAACG AGCCTTGGTT
ATGCGCCGTG GCCAAGCTAT CCAAGCGGCC GAACTCGGTT TGTCAGTGGG CTGTGAAATT
CAATTACCAG AATCTCATAG CCCTATTTCT GGGCTGAAAG AATCTAAACG CCAAGCCGAA
TTTCAATTCA TTGTCGATAT TTTAAGGCGT GTGCAAGGAA ACCGCAGTCA GACTGCTGCG
GAACTTGGCA TGACCACAAG AGCGCTAAGA TACAAGTTGG CTCAAATGCG AGATGCGGGG
ATTGATGTCG ATCAGCTACT GCAGCGTGCG GGTAATGCAG CTTGA
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| Protein sequence | MDNLKIRLVD FTLSVATLER LKSQGFTLWQ QGNTVPWLTI INLSQFKPSQ LAGHLSGFSS
KNFLALLAPE QGELAAAAMQ SGVQDYLLLP VEDEQLIASI SRLHRLEQPD PKLIVAAPVS
RQLLMLAHRA ATTEATVLLT GESGTGKEPL ANYIHRHSSR AHKPFIAINC AAIPETMLES
ILFGHTKGAF TGASSDKAGK FEQANGGSLL LDEIAEMPLA LQAKLLRVLQ EREVERLGGS
QAIPLDIRVI AATNKDLRQA VENGTFREDL FYRLDVLPLK IFPLRDRKTD ILPLAEHFLH
RFDTQGVECY FSRQAREALL AYDWPGNVRE LENCIQRALV MRRGQAIQAA ELGLSVGCEI
QLPESHSPIS GLKESKRQAE FQFIVDILRR VQGNRSQTAA ELGMTTRALR YKLAQMRDAG
IDVDQLLQRA GNAA
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