Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3647 |
Symbol | |
ID | 4020204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4366300 |
End bp | 4367034 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637957708 |
Product | flagellar basal-body rod FlgF |
Protein accession | YP_564645 |
Protein GI | 91794994 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAGA TGCTGTACAC GGCGGCCAGC GGTGCGAGTC GCATTATGGA AGCGCAAAGC ATAAGGGCTA ACAACTTAGC CAATGCGGAA ACCACAGGTT TTAAGGCTGA CTTAGAACGA GTTAAATCCA TGGCTTTACC TGGGGTGGAA GCTTCGCTGA GCACTCGCGT ACTGGTGCAA ACCCAGAGCA ATGGCTTTAG CCAGCAAAGC GGTGAGATGA ATCACACCGG CCGTAACCTT GATATGGCAA TTCGTGATCG CGGCCTATTT ACTGTGATGG TGGATGGCGG CGAAGCTTAT ACCCGCGCAG GGGCCATGAT AGCAGACGCC GAAGGGCAGC TTACCGTTAA TGGTCGTCCG GTTCTGGGTA TCGATGGCCC TATGGTGCTG CCTGAGCATA AGGATTTATT CGTCGGTGAA GATGGCACCA TCAGTGTGCT GCCGGCAGAA GGCGGGGTTA TTCAAGAAGT GGGCCGCCTG AAAATGGTTA ATCCTGAACT TAATGAGTTA ACTAAAGGCG CCGATGGCCT GCTTTATCCT ATCGCTGCAG GCGTGTTAGC CGCCGATGAT GGCGTACAGG TGGATAGCGG TTATTTAGAG TCTAGTAATG TGCAGGCGGT GTCAGAGCTT ATTGCATCCA TGGATTTGAG CCGTCAATTT GAAATCCAAG TGAAACTGAT GAAAAGCGCC GAAAAACTCG CAGAAGCGGG TAATCGCCTG ATAAGAAATG CTTAA
|
Protein sequence | MDKMLYTAAS GASRIMEAQS IRANNLANAE TTGFKADLER VKSMALPGVE ASLSTRVLVQ TQSNGFSQQS GEMNHTGRNL DMAIRDRGLF TVMVDGGEAY TRAGAMIADA EGQLTVNGRP VLGIDGPMVL PEHKDLFVGE DGTISVLPAE GGVIQEVGRL KMVNPELNEL TKGADGLLYP IAAGVLAADD GVQVDSGYLE SSNVQAVSEL IASMDLSRQF EIQVKLMKSA EKLAEAGNRL IRNA
|
| |