Gene Sden_3645 details

Gene Information

• Locus tag: Sden_3645
• Symbol: flgH
• ID: 4020202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 4364832
• End bp: 4365491
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637957706
• Product: flagellar basal body L-ring protein
• Protein accession: YP_564643
• Protein GI: 91794992
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.651179
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGGT TATTGCTGTT AGCTTTCTTA TTGTCAGGTT GTGCAGCACA TCTTCCTGAA 
GCTGAAACTA AGCCTGATAC TAAAGATTGG GCACCACCAG AAGTGGATTA CAGTCTACCG 
GACGCTAAAG ATGGCAGCTT ATATCGCCCA GGGTATATGT TAACCCTGTT TAAAGATAAG 
CGTGCTTATC GTGAGGGCGA CATACTCACG GTAGCCTTGG ATGAAAAAAC TTATTCAAGT 
AAAAAAGCCG ATACCAAGAC CAACAAACAG CAAGGCATGT CATTAGGTTT AAGTGGCTCA 
GCGGGCAGTG AAGATGTCAA AACCAATGGC AATGCTTCGC TTAATCGCGG CTTTTCAGGC 
ATGGGCTCAA GCACCCAGCA AAACCAGTTG TCAGGTTCAA TTACCGTGAC GGTTTCCAAA 
GTGTTGCCGA ACGGCACCTT GCTTATTCGC GGCGAAAAAT GGTTAAGGCT CAATCAAGGG 
GATGAATACC TGCGTTTGTT AGGGCTTATT CGCGCCGACG ATATTGACAA CACTAATACT 
ATTTCTTCCC AACGTATCGC CGATGCACGG ATTATCTATG GTGGCCAAGG CGCCATCGCC 
GACAGCAATG CTATGGGTTG GGCTTCTCGT TATTTTAATA GCCCTTGGTT CCCGCTTTAA 

 

Protein sequence

MRWLLLLAFL LSGCAAHLPE AETKPDTKDW APPEVDYSLP DAKDGSLYRP GYMLTLFKDK 
RAYREGDILT VALDEKTYSS KKADTKTNKQ QGMSLGLSGS AGSEDVKTNG NASLNRGFSG 
MGSSTQQNQL SGSITVTVSK VLPNGTLLIR GEKWLRLNQG DEYLRLLGLI RADDIDNTNT 
ISSQRIADAR IIYGGQGAIA DSNAMGWASR YFNSPWFPL