Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3448 |
Symbol | rbn |
ID | 4020002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4127109 |
End bp | 4128050 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957506 |
Product | ribonuclease BN |
Protein accession | YP_564446 |
Protein GI | 91794795 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.016816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATATAC AACAACAGAC ACGTGGATTT CGCTATTTCT ATATATCCGT TTGGCGATTT ATCTTACATC TAAAAGCCCG TTTGATTGAT GATCAAATCA ATATTCGTGC CGGACATTTG GCTTATGTGA CCTTGCTTTC CTTAGTGCCT ATGATAGCCG TGACCATGTC CATGCTATCG GCCTTCCCCG TTTTTAAAGG CATACGTGTC AATATAGAGT CCCTCGTTTA TTCATATTTT TTACCCGCAG CAGGGGATTC GGCTCAGGTC TATATCAATG AGTTTGTTAA TAATGCTTCT AAAGGAACCT TCGTCGGCAT CATTGCCTTA TTAGTTGTGG CTATTCTATT GATATCGGCG ATAGACAAGG CATTGAACAA TATCTGGCGA ACAACGGAAA AACGCTCCTT AGTGGTGTCC TTTTCGATGT ATTGGATGGT ACTGACTTTA GGGCCAGTAT TAATGGGGTC AAGTTTAGTG GCCACCTCTT ATGTGGTCTC CCTCGAGCTC TTTAGTCAAA GTGAATTATC TGGTCTGTTA CCTTGGCTGG TAGAACGATT ACCTATGCTG TTCTCTGTGG CATCTATCTT ATTACTGTAT ATGGTAGTGC CGACTCAAAA AGTGAGGTTT TTCCACGCCT TGCTCGGTGC AGTGGTGGCG GCGCTACTAT TTGAGGCGGG TAAGCGTGCC TTTGCCTATT ACGTGACTCA ATTCCCAAGT TATGAAGCCA TCTATGGTGC ATTGGCCACA ATTCCAATCT TGTTCGTTTG GGTGTATTTA TCTTGGATGA TAGTGCTGGT GGGTGCCGAA ATAACTGCGG CTCTGCCTGA GTACTTAGAC GACCCTTTCG AAAAGGACGG CACTAAGGCA ACCACAGCCT TGACTGAAAA TAAGGAAGTA GATGAAAGTG AGCCTAATCA GGGTAACGAT ACGATAGCGT GA
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Protein sequence | MDIQQQTRGF RYFYISVWRF ILHLKARLID DQINIRAGHL AYVTLLSLVP MIAVTMSMLS AFPVFKGIRV NIESLVYSYF LPAAGDSAQV YINEFVNNAS KGTFVGIIAL LVVAILLISA IDKALNNIWR TTEKRSLVVS FSMYWMVLTL GPVLMGSSLV ATSYVVSLEL FSQSELSGLL PWLVERLPML FSVASILLLY MVVPTQKVRF FHALLGAVVA ALLFEAGKRA FAYYVTQFPS YEAIYGALAT IPILFVWVYL SWMIVLVGAE ITAALPEYLD DPFEKDGTKA TTALTENKEV DESEPNQGND TIA
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