Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3316 |
Symbol | |
ID | 4019864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3949803 |
End bp | 3950828 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637957369 |
Product | peptidase M28 |
Protein accession | YP_564315 |
Protein GI | 91794664 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0540148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAT TTTTGAACAT TAACTGTGTT TTCCCATCGC GCGGCGCTAA ACGCCATGAC CGCTGTTTAG CGCCACTCTT TTTAGCCCCT CTACTGCTGC TATTACTCAT GCTAAGTGGC TGCGCCTCCA CCCCAAGTTG CAATCAGCCG CTTCACACCC TCTGGGTAGA CAAGGCGCAG CTCACCCAAG ACTTGCAAGT ATTAACCAGC AGTGAATTTC AAGGGCGGAA AACCCGTACT CGTGGCGCTA AACTCACCCA AGACTTTCTA GCAAACCGCT TTAAGGCGCT TAATTTAACC CCTTGGCAAG GCAGTTATCA CGCACCTTTC GACTACGGAT TTTTATTGTC CAGCCGCTCA GGCGTCAATA TGATTGGGGT GATCCCAGCT CAAAAGCCCG CTTCTCGCTG GCGAATTATT ACCGCCCATT ACGATCATTT AGGCAAGCAA GGCAGCCATT ATTATCCTGG CGCCGATGAC AATGCCTCAG GCGTTGCGGC GCTGCTGAGC ATTGCCGCAC AGTGGCAGCG TGAACCTATG GAAGAGGTGA ATTTGATGTT AGTGGCGACG GATGCAGAAG AGCCCGGCCT TTATGGAGCC TATGGCTTAG TAGAGCAGTT AAAAACTATG CCTGAAATGC AGATAGAACT GGCGCTGAAT TTAGACATGA TAGGTCACCC CAGTCGTCCG CACGCCATTT ACATGGAAGG CGAGCAAAAC TTAACCCATT TTGACACCTT AGCCCCGACC CTGACCCAGC ACAGCAAGCT TTGCCTTAAG GTCAATCGCT CCAGAGTCAG AGGCGCTAGC AGCCTTAACA TAGATTGGCT TAGGGCCTCT GACCATTATG CCTTCCATAA AGCCAATATC CCCTGGCTTT ATTTAGGGGT ACCACCACAT AAGGATTATC ACACTGTGAA TGACACCTTA GACACCATAA ACCTCGATTT TCTCGGCGCC ACCACCGAAC TTGCATTCAC ATTAATCCAA CTGCCAGTTG AAAAAATAAA GCCTTCAAGC CTTTAA
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Protein sequence | MKGFLNINCV FPSRGAKRHD RCLAPLFLAP LLLLLLMLSG CASTPSCNQP LHTLWVDKAQ LTQDLQVLTS SEFQGRKTRT RGAKLTQDFL ANRFKALNLT PWQGSYHAPF DYGFLLSSRS GVNMIGVIPA QKPASRWRII TAHYDHLGKQ GSHYYPGADD NASGVAALLS IAAQWQREPM EEVNLMLVAT DAEEPGLYGA YGLVEQLKTM PEMQIELALN LDMIGHPSRP HAIYMEGEQN LTHFDTLAPT LTQHSKLCLK VNRSRVRGAS SLNIDWLRAS DHYAFHKANI PWLYLGVPPH KDYHTVNDTL DTINLDFLGA TTELAFTLIQ LPVEKIKPSS L
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