| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3304 |
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| Symbol | |
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| ID | 4019852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3933561 |
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| End bp | 3935303 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957357 |
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| Product | transcriptional regulatory protein-like protein |
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| Protein accession | YP_564303 |
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| Protein GI | 91794652 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTCATC ATCACACTAG CCCATATACA GGTGACGCTA TCTACTACCG CTACCAATTT
AACGACCTCA CACTCAATAC CCGCTTAGGT ACCTTAGTGC GAGATGACAA ACTCGAAGTT
AGGCTGCCTT GGCTTAGCTA TCGCCTGTTA TCCGTACTAT GTGAAGCTGC CCCTGGGATT
GTGAGCCAAG AGCAATTGCT TGAAAAAGTC TGGCCGGATG TGGTGGTGGG TGATGAAACC
CTAAAGCAGA GAATAAAGTT ACTCAGGCGC GCACTGAATG ATGATGCCCA TACCCCGATT
TATATAGAAG CTATTCGAGG GCGAGGTTAT CGACTATTGC CTCAAGTCAT AGTGACCAGT
GAGGTCACCC CAACGCGAAT GACAAGTTTA GATTTAGCCA ATGACACCCA TGTGATGCCA
GAAGATGGCA AGAGTTATCC GTTATTTTGG AAACTAACCT CTTTAAGTTT AGCGGCCTTA
ATGCTCATTT TTGCTCTTGT AGCGCTATTC ATTTCATCGG GCGATAACCT CGCCAAGCTT
GACGAAAACG CACCGTCATC GCTAGCCTCA CCAGGTTTTG ATGTTGAACT CTACCTCAAG
GGGCTGGATT ACTATCATAG GTATCGAGAA GCCGATAATC TCCATGCCAT AGAGTTGTTC
ACTTCGGCTC TTGCCATCAA TCCAAATTTA GCCTTAGCCT ATAGCGGTTT ATCCGATGCC
TATAGCCAAG GCGTGTTTCA ATTTAACGCC CCGCGGCTCT GGCAACAAAA AGCCATCGAC
GCCGCTTATA AGGCCATTGC CTTAGATCCC AACTTGGCGC AAGCCTACAA ATCTTTGGGC
CTGGCTTACT ACAACAAGGG CTGGCTCAAT AAAGCCATCA ATGCCAATGT TAAAGCATTG
CAAAAACAAG CTAACTATCA TGAAGCCATG ACAAACATAG GTTTCATCTA CCGAGAAATG
GGCCAGTTAT CCAAATCTAT GATGTGGATT AATAAAGCCC TCACTCTCAG CCCCAACCAT
AGCGTTAGCT GCGTGCATAA GGCGCAAAGC TTAATCGCCC TAGAAGACTT CCCCAAAGCG
CAGCTGTGGT TGGACCGCGC ATTAAGCTTA CAACCTGACT CGCTGCTGGC CAATGACGCG
CAGGGACTAT GGTATCTTCA TCAAGGGCGA TTCCTGCAAG CCAAGGCCCA TTATTTTAAG
CTCTCGCAAG ACCTGCCGCG ACAAACTCAC TTTATTCACG GTCTAGCCTT AAGCCAGCTT
TATCTTGGAG AGTTTCAACT CGCCATAGAT ACCAGCAAAT CCCTATTAAA CTCAGACAAC
CCCCAAATTG CCTTACAAGG TCGGTTACTT GCAGCCCTTG CTAAGTCAGC ATTAAAAGAG
AATGACAATC AACAGCTTGA AGATGAAATT TCGATGAGTG ATGGTAATGT TTCCGAGGTC
TCAAGTGAGC ATAGCATTGC ACTTGAGCTG CTAACCCAAG AATTTAAACA GCGGTTACTG
CAAGGCTCAG ACAGGGCGGC AGATAGCTTA TCGCTGGCAT TGCTGTATGC CGTGCAAAAT
GAGCAAGAGG CCAGTTATCG TTATTTGATC CAAGCAATCA ACCAAGGTTA TTTGGCGCAA
CAATTACTGA CTCTGCACCC CAGTATTAAC ACCTTGCGCA ATGACAGTCG CTTCACACAA
TTAATGGATG AGTTGCTACA GCAGCTAACC TTCCAGAAAC AAGCCTATCA AGAGCAAAAG
TGA
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| Protein sequence | MVHHHTSPYT GDAIYYRYQF NDLTLNTRLG TLVRDDKLEV RLPWLSYRLL SVLCEAAPGI
VSQEQLLEKV WPDVVVGDET LKQRIKLLRR ALNDDAHTPI YIEAIRGRGY RLLPQVIVTS
EVTPTRMTSL DLANDTHVMP EDGKSYPLFW KLTSLSLAAL MLIFALVALF ISSGDNLAKL
DENAPSSLAS PGFDVELYLK GLDYYHRYRE ADNLHAIELF TSALAINPNL ALAYSGLSDA
YSQGVFQFNA PRLWQQKAID AAYKAIALDP NLAQAYKSLG LAYYNKGWLN KAINANVKAL
QKQANYHEAM TNIGFIYREM GQLSKSMMWI NKALTLSPNH SVSCVHKAQS LIALEDFPKA
QLWLDRALSL QPDSLLANDA QGLWYLHQGR FLQAKAHYFK LSQDLPRQTH FIHGLALSQL
YLGEFQLAID TSKSLLNSDN PQIALQGRLL AALAKSALKE NDNQQLEDEI SMSDGNVSEV
SSEHSIALEL LTQEFKQRLL QGSDRAADSL SLALLYAVQN EQEASYRYLI QAINQGYLAQ
QLLTLHPSIN TLRNDSRFTQ LMDELLQQLT FQKQAYQEQK
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