Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3300 |
Symbol | |
ID | 4019848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3929601 |
End bp | 3930113 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637957353 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_564299 |
Protein GI | 91794648 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTG TGTTAGATAC ACACATATTC AAACAGATCA CCCTCCAGCC CGGGGAATTT CATTTTGCCC AAGGAAAAAT CAGAATAAAC ACATTATTAG GCTCTTGTGT TGCCATTACC TTATGGCACC CCGATAAACA TCTTGGGGGT ATGTGTCATT ATATGCTGCC AAAAAGCAGC CAGACCCAGC GTTTAGAACC AGGTTTCTTT GCCGATGGTG CTATGAAGTT ATTCCTTGAT GCCATTAAAC TGCACCACAC CCAGCCAGAG GATTATCACG TCAAACTTTT TGGTGGTAGT AACATGTTTC GTCAGCTCAA TAGTCATCAT CATTTCCTCA ATGTAGCGGA GAAAAATATT GCCGCTGGAC TAAAATTACT AAAACAAAAC GGTTTTCACA TTCAGAATAT GGATTTAGGC GGTGCTGTTC ACAGGCAAGT TTACTTAGAG CTATGGAATG GGGATGTCTG GGTAAAATAT GGTGGGATTG AGACTGCTAG AGACACATTA TGA
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Protein sequence | MNTVLDTHIF KQITLQPGEF HFAQGKIRIN TLLGSCVAIT LWHPDKHLGG MCHYMLPKSS QTQRLEPGFF ADGAMKLFLD AIKLHHTQPE DYHVKLFGGS NMFRQLNSHH HFLNVAEKNI AAGLKLLKQN GFHIQNMDLG GAVHRQVYLE LWNGDVWVKY GGIETARDTL
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