Gene Sden_3269 details

Gene Information

• Locus tag: Sden_3269
• ID: 4019817
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3899904
• End bp: 3901796
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637957322
• Product: N-6 DNA methylase
• Protein accession: YP_564268
• Protein GI: 91794617
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000126055
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTGGAT TACTTGTGGC AAATGAAAGA ATTACCGAAA ACTATGTAAG AGAGAAGTTG 
AGAGAAAACG GCTACTATGA AGCTGACAAT GGCGTAGTCA TTGAAGAACA AAAATCGCAA 
ATCAAGCGAG TTCAAACCCT CTTAAAATCT GCAAGTAAAG CGAAAACAGG TAAAGGCGGC 
TATCCAGAGT TTATTATCAC TTGGGAGTCA GATCCTAACT TCCTAATTGT GGTTGAGTGT 
AAAGCTGACA CTAAGTATCA CGAAAGCCCA GATTTAGACA AACCAAAAGA CTATGCTGTT 
GACGGTGTTT TACACTACGC TAGGTATCTG TCAAAAGACT TCACTATCCT TGCCTTGGCT 
GTTAGCGGCA CGTCAGAAGA CTATACAAAA GTGTCTAACT ACTTAATACC TTGTGGAAGT 
AAAGATCACA AAGTCTTGAC TAATGAAGAT GGCATTGAAG TAAACGATAT TCTTTCATTT 
GAAGACTATT ACCGTTTAGC TTCTTTCGAC CCACAGGTTG AAAGGAAACG TCATAGTGAT 
CTATTAGCGT TTGCAAAAGA CCTCCACGAG CTTATCTGGA CAGCAGCGAA AATATCAGAA 
GAAGATAAGC CTTTGTTAGT TAGTGGAACG TTGATTGCAC TAATGAACCA ACCGTTTTTA 
AACTCATTTC AATATTACAG TCCAGAGGAT ATGCCACGAA AATGGCTAGA AGCGATCAAA 
GACGAACTTG ATAAAGCTGA TATTCCCAAG GCTAAAAAAG ACACAATGCG TCAACCTTAT 
GCGACTGTTG CTGGACAGCC AAATTTAGGC AAACCTGATG CAAAAATCGC CAAGAAGTAT 
CCGAAAGGTG TTCTTTACGA GGTGATCAAA GAAATCAACG ATAATGTCTG GCCATTTATT 
AGCGTTTATC ACAACTTTGA CGTTGTGGGG CATTTTTATG GTGAGTTCTT AAAATACACT 
GCAGGGGATA AGAAAGCCCT TGGCATAGTC TTGACTCCAA GACACGTAAC AGAGCTATTT 
TGCGATATCG CCAACATTAC TAAAAAAGAC ACTGTTATAG ATATCTGTGC TGGCACTGGT 
GGCTTCTTGA TTTCAGCAAT GCACCGAATG CTGAAAACAG CGATGACGGA AGAAGAACGT 
TTAGACATTA AAAAGAACCG TCTGATCGGT ATCGAGAACA GTCCAAAAAT GTTTGCACTA 
GCTGCAAGCA ATATGATCTT ACGGGGTGAC GGCAAAGCAA ACCTACACCA AAGTAGTTGT 
TTCGAACCAA CGTTAAAGAG AGCTATTACA GTTCCCGATC CTGCTTTGGG TGTTAAAAGG 
CCAAATATTG GTTTGCTGAA CCCTCCTTAT GCTCAATCAA AAAGCGATGC AGAGCTACAC 
GAACTCTACT TTGTGAAAGA AATGCTAGAC CTTCTCGAAA AAGGGGGGAC AGGAGTAGCA 
ATTATCCCTG TGAGTTGTGT GATAATGCCG AACAAAGTTA AACACGAGAT ATTGCAAAAA 
CACACGTTGA AAGCGGTAAT GTCTATGCCT AGCGAGCTTT TCTATCCAGT TGGAACGGTA 
ACTTGTATCG TTGTGTTTGA AGCACATAAG CCGCACAAAG AAACAAACAA AAAAACGTGG 
TTTGGTTACT GGCGTGAAGA TGGCTATGTC AAAACAAAGC ATATGGGACG CATTGACTTA 
AACCATGAAT GGCAAGATAT CAAATCTCGT TGGCTAGAAG CTTATAGCAA CAATGAAGTG 
CACGCAGGTG AGTCTGTAAC TGCATATGTT GACGCTGATA GCGAATGGAT TGCGGAGGCA 
TATCTAGAAA CTGATTATTC AAAATTAACC AAAAAAGACT TTGAAGAAGT GGTAAAAGAT 
TACGCTTTGT TCAAGCTAAC AAATGATATC TAA 

 

Protein sequence

MVGLLVANER ITENYVREKL RENGYYEADN GVVIEEQKSQ IKRVQTLLKS ASKAKTGKGG 
YPEFIITWES DPNFLIVVEC KADTKYHESP DLDKPKDYAV DGVLHYARYL SKDFTILALA 
VSGTSEDYTK VSNYLIPCGS KDHKVLTNED GIEVNDILSF EDYYRLASFD PQVERKRHSD 
LLAFAKDLHE LIWTAAKISE EDKPLLVSGT LIALMNQPFL NSFQYYSPED MPRKWLEAIK 
DELDKADIPK AKKDTMRQPY ATVAGQPNLG KPDAKIAKKY PKGVLYEVIK EINDNVWPFI 
SVYHNFDVVG HFYGEFLKYT AGDKKALGIV LTPRHVTELF CDIANITKKD TVIDICAGTG 
GFLISAMHRM LKTAMTEEER LDIKKNRLIG IENSPKMFAL AASNMILRGD GKANLHQSSC 
FEPTLKRAIT VPDPALGVKR PNIGLLNPPY AQSKSDAELH ELYFVKEMLD LLEKGGTGVA 
IIPVSCVIMP NKVKHEILQK HTLKAVMSMP SELFYPVGTV TCIVVFEAHK PHKETNKKTW 
FGYWREDGYV KTKHMGRIDL NHEWQDIKSR WLEAYSNNEV HAGESVTAYV DADSEWIAEA 
YLETDYSKLT KKDFEEVVKD YALFKLTNDI