| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3010 |
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| Symbol | |
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| ID | 4019535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3613992 |
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| End bp | 3615611 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957061 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_564011 |
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| Protein GI | 91794360 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGC TTAGTAACAT TTCAATTTTT AAAAAAGTGG CAATAATTTT TATTTTATCT
GTGATTATTT TTGCAGTTAA CTTAGGCATT AGTGTCGTTG CCATCAATAA AAACCGTGAC
ACCATGGACT TCATGCAGAC TAAGGTGAGT CAGAGAATAG AGCTTGCCAA TCAAAACGTC
ATTTTTATCG AAAGGCTCGA TGAACTTTAT ACGCAAGCGG TATCCTTTGC CGATGAAGAT
TTAATAAAAA CGGCTAATAA GACCTTCACC TCTTTGAAGA ATATCTTGAC TCAACTGGGG
GCGATAGACC TTGAACAGGC ACAGAACTTG TCGCAGTTGT CCGCTCAGCT AGAGCAATAT
AATACTATGA CCTTAAATTT AGCCACTAGC ATGCTAGATG GTACCGCCGA TATGTCTAAA
TTGGGGGAGA TCAGTAAGGC TAAAGCGAAA GTGTTTTCTA CACTCACCAG TGGCATTCAA
GAATACAAGA AAGCCAAGGT CAATGAATTT AGTCTGACTA TCAAGGAAGC GGGGGACCGC
TCGGATCAAA GCCTGTATTT AAGCTTGTCT ATCGGACTTG TTCTCTTGAT TGTGATGGCG
GTAACGACCA TGTCTATCGC CAGATCCATC AGCGGCTCGG CAAGCAATGT GGCGGACTCT
CTCGGTGAAC TTGCCGATGG TAAAGGAAAC TTAAAGCATC AACTGGAGGT CAGGGGTACG
GATGAGCTGA GCCAAGTGTC GGCTAACTTT AATCGCTTTC TGCGCTTACT TGCAGGCTCA
ATTCAACAAG TGGTGAATGT CACTAGCCCC TTGTTTGAAA GTGCGCATAC CTTAAAAGAG
CGTATGTCTG TGGCCACTAA AGCGACTCAA AAGCAGAGCC GCGACGCCAA AAACGTGCAA
ACTTCCATGG AAGACATGCG TCACAGTGTG ATCGATATCT CTCATAGCGC GCAGCAGGCG
GCAGAGGCCG CTCATGTGGC AGAGCAAGAA GCCACCGATG GCCTCGCTGT GGTGCAGCGC
ACCATTAACA TTTCTCAGGA GTTAAATGCC GGTATTGAGC TTGCCTCGAA TTCAATTAAT
GAACTGGCTA AAGATACCGT CAGTGTTGGC TCAATTTTAA ACGTCATCAC CTCCATTGCC
GAGCAAACCA ACTTATTGGC CTTGAATGCG GCCATCGAAG CAGCCCGAGC CGGAGAGCAA
GGGCGAGGTT TTGCCGTGGT AGCTGATGAG GTGAGGGCAT TAGCCTCCAA AACCGCCGAT
GCCACCAAGG AAATACGCTT GGTACTTGAG CGTTTAAAGG GGGCGGCAGA ATCGACGGTT
AATACCATGG GCGGCGCGAT TACTAAAGCC TCTAGCAATG AGAAGTTTGC TCAAGATACT
GGCAATGTGC TTAAGTCGAT TCAAGCAAAG ATTGTGAGTA TTAACAAGAT GAACACCGAT
ATCGCATCTT CTACTGAGGA GCAGTCCAAT GTGGCGACCC TAGTGGGGAA TAATGTAGTA
GAGATGAATG CCTCGTTCGA TCAAACCTTG CAAATTCTCT CCGAAGTGAG GGATGTATCA
GAAGGTTTAT TGGGCCTGGC GGACGATCTT AAGAGCGCCA CCTCGCAATT TAAACTTTAG
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| Protein sequence | MNWLSNISIF KKVAIIFILS VIIFAVNLGI SVVAINKNRD TMDFMQTKVS QRIELANQNV
IFIERLDELY TQAVSFADED LIKTANKTFT SLKNILTQLG AIDLEQAQNL SQLSAQLEQY
NTMTLNLATS MLDGTADMSK LGEISKAKAK VFSTLTSGIQ EYKKAKVNEF SLTIKEAGDR
SDQSLYLSLS IGLVLLIVMA VTTMSIARSI SGSASNVADS LGELADGKGN LKHQLEVRGT
DELSQVSANF NRFLRLLAGS IQQVVNVTSP LFESAHTLKE RMSVATKATQ KQSRDAKNVQ
TSMEDMRHSV IDISHSAQQA AEAAHVAEQE ATDGLAVVQR TINISQELNA GIELASNSIN
ELAKDTVSVG SILNVITSIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALASKTAD
ATKEIRLVLE RLKGAAESTV NTMGGAITKA SSNEKFAQDT GNVLKSIQAK IVSINKMNTD
IASSTEEQSN VATLVGNNVV EMNASFDQTL QILSEVRDVS EGLLGLADDL KSATSQFKL
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