Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2980 |
Symbol | |
ID | 4019505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3566790 |
End bp | 3567971 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637957031 |
Product | peptidase M50 |
Protein accession | YP_563981 |
Protein GI | 91794330 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0270746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCT TAAACATTGA ATGCCTTGGA AAACGCTTAC GCCTTGAGGC TTCTATGGCC GGTTGGCAAC AGCTATTTTG GGACAATCAA TTGGTGTCTC AGCTCCCTGC AAGCCCAGAT AGGCAAGCCT TTAATATTCA TTTGTTTGAG CTTAGCCAAA CACCCGAGTC TCCAACAAAT CACCCCTCAG AAAATCAGGC CGGATCATCT GCCCCAATTG CGGATATCCC AGATGATGCA GATATTTCAA TAGCGCCGCA TGTTAAGCCT ATTACTGTGC GCTTAGAAAT CGATGTTATA TGGCAGCCGT TTAACTTGAG TTACTGCTTA TTAGTGGATG ATGAGCAAAT CACTCAAGGA CAGAGAAGCA CTAAGGATAT CGAAGCCCAG CAAGCTGAAA TAGCACCAGT TAAAAAAGTA AACTTCAGTG TAGTCGGCTT AGCCTCCCTC GGGTTTAAGC TGTTAAAAAG TGCTAAAGTC ATCAAGGTTT TGTTAGCTAG TGCCAGTGTT GCCGCTTATT CCTGGCTATT TTCTATAGAA TTTGCCCTCG CCCTTATAGG TTGTTTAGTT TTTCATGAAT ACGGTCACAT CAGGGCAATG AAGTATTTTG GTATGAAAAC CAAGGGAATA TACCTCATCC CCTTTGTCGG TGGTCTGGCG TTAACCGATG AGCGCATCAA TACTCGTTGG CAAGATGTGG TCATATCCAT CATGGGACCC AGCTTTGGTC TCTTGCTTTC TATTGGCTCC TTGGTGCTTT ATTGGGTAAC GGGTAATGTG TTCTTCGCAG GGCTTGCAAG CTTTAACGCA TTACTCAACC TGTTTAATTT ATTGCCTATT TTACCTTTAG ATGGTGGCCA TATTTTAAAA AGCATCAGCT TTTCCATGAA CAGCATCACA GGCTTAGTCG CTTGTATTCT AGGGGCGGCA GTCGGGGTTT ACATCAGTTA CAGCTTAGGC TTAGCCCTAT TGGGCTTTCT ATTGTTAATT GGTAGTCTTG AGATAGTGTT TGAATGGCGC AGCCGTCATC AAAGCCATTT GTTACCTTTG GACAGATATG GGCAAGTATT TTCTACCATC TGGTATTTTC TAACTGTAGG CCTGCTTATT GGGATTATTT GGTATCTCGC CCACAGCAGT GACAGCATAT TGGCTCTGCC ACTAGACATT TTAAAGAGTT AA
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Protein sequence | MELLNIECLG KRLRLEASMA GWQQLFWDNQ LVSQLPASPD RQAFNIHLFE LSQTPESPTN HPSENQAGSS APIADIPDDA DISIAPHVKP ITVRLEIDVI WQPFNLSYCL LVDDEQITQG QRSTKDIEAQ QAEIAPVKKV NFSVVGLASL GFKLLKSAKV IKVLLASASV AAYSWLFSIE FALALIGCLV FHEYGHIRAM KYFGMKTKGI YLIPFVGGLA LTDERINTRW QDVVISIMGP SFGLLLSIGS LVLYWVTGNV FFAGLASFNA LLNLFNLLPI LPLDGGHILK SISFSMNSIT GLVACILGAA VGVYISYSLG LALLGFLLLI GSLEIVFEWR SRHQSHLLPL DRYGQVFSTI WYFLTVGLLI GIIWYLAHSS DSILALPLDI LKS
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