Gene Sden_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2930 
Symbol 
ID4019455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3496489 
End bp3497106 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID637956981 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_563931 
Protein GI91794280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000123984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAG AGACTTGGAT AGGGCTATTG GCCATTTGTT GTTTAGGAGC TATGTCACCG 
GGACCTAGCC TTGCCATGGT GGTAAGGCAC ACCCTCTCCG GAGGCCGATT ACATGGCATA 
GTCTGCGCTT GGGCGCACTC CATCGGCATA GGTGTCTACG CCTTAGTGAC CTTGTTAGGC 
TTAGGCGTTG TACTTAAGCA GGCGCCCATA GTGTTTAATA TTATTGCCGT GCTAGGAGCG 
CTTTATCTTG CTTGGCTTGG TTTGCAAGCA TTGCGCTCTC AAGGGGCAAG TGAGCAAAAG 
CTGGCAGCTG CAGAACCTAC GAGCTTACTG ACGGCAGCGC GAGATGGGCT AGGAATATCA 
TTATTTAATC CTAAAATATT GCTATTTTTT TTAGCGCTAT TTAGTCAATT TGTATTGGCG 
GCCAATACGT TTTCTGGCCA GTTAATTATA GTCGCAACCC CGTTGATTGT TGATGGGCTT 
TGGTACACCT TCATTGCGAT GATTTTGTCT CATTCGGCGG TCTTACCTAA ATTGCGGGCC 
AAAGCAGTTA TTATTGATAA AATCTCTGGC ATAGTATTAA TTATATTAGC AATTAATGTA 
CTGTTAAGAT TATTTTAG
 
Protein sequence
MSIETWIGLL AICCLGAMSP GPSLAMVVRH TLSGGRLHGI VCAWAHSIGI GVYALVTLLG 
LGVVLKQAPI VFNIIAVLGA LYLAWLGLQA LRSQGASEQK LAAAEPTSLL TAARDGLGIS 
LFNPKILLFF LALFSQFVLA ANTFSGQLII VATPLIVDGL WYTFIAMILS HSAVLPKLRA 
KAVIIDKISG IVLIILAINV LLRLF