| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2800 |
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| Symbol | |
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| ID | 4019319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3346024 |
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| End bp | 3346908 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956846 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_563802 |
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| Protein GI | 91794151 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGC TGACGGCGAC AAAGAGCTTT AATTTACTGG TGGAACATGG CAGTTTCAGC
CAGGCCGCCG CAGTGGCTGA AATATCCCCC TCGGCCATGA GTAAGCGCAT CGATTGGCTC
GAGAAACAAC TGGGATTAAG CTTGTTTGTG CGCACCACAC GTCAGGTTAA TTTGACGGAG
GCGGGGTTCG ACTTCTTGTC TCGCTCAAAA GATCTTGTCG GCCAATTTGA AGACATGATA
AGTGAGACGC AGCAATTTGC TAACCGGCCC TCAGGCACCC TCAGAGTTGC CGCCAATTCT
GTCGTCGGCA GTGCAATTTT AATGCCCTGT ATCGAAGCGT TTTTAGTGTT ATACCCAGAA
GTCACCCTGC ATCTGGACAT ACTTCCCTTT GGCGAGTTTC CTGATTTAGA CCACGATCTC
GTCCTGTGCC GCAAGTTCGA CAATTTCAAT TCCAGCGCCC ACAGGGGCAC TAAGTTATAT
AACTACCGCG TCGGCTTATA CGCCGCCCCC CACTACTTAG CCAATAATCC TGCCATTACG
CAGCTCGCCG ATGTCAGTGA ACATAAGATG GTGATGAACA ACTATTACCG CAAGCAAGGC
CGGCTCGAGA TGGCTAATGG GGAATCCTGT GAGCTGAATA ATTTCAATTT CATCTCGGAT
AATGTCGACG CCCTACTCTA CGCTGCCACC AAAGGCATGG GGTTATTTTT TGCCTCTCCT
TTGTATTTAA AGCGTGAGTT AGAACAGGGC TTATTAGTGC CTGTGTTGCC TCATCTGCAG
GGGCAAGAAA TGGAGTTGTG GGGGTTTTAT CCCAATAAGA AATACCTGCC GATTAAGACG
CGCTTGTTAT TAGACTTTCT CAAAGCAAAA TTAGTCAGTA CTTAA
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| Protein sequence | MDWLTATKSF NLLVEHGSFS QAAAVAEISP SAMSKRIDWL EKQLGLSLFV RTTRQVNLTE
AGFDFLSRSK DLVGQFEDMI SETQQFANRP SGTLRVAANS VVGSAILMPC IEAFLVLYPE
VTLHLDILPF GEFPDLDHDL VLCRKFDNFN SSAHRGTKLY NYRVGLYAAP HYLANNPAIT
QLADVSEHKM VMNNYYRKQG RLEMANGESC ELNNFNFISD NVDALLYAAT KGMGLFFASP
LYLKRELEQG LLVPVLPHLQ GQEMELWGFY PNKKYLPIKT RLLLDFLKAK LVST
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