Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2729 |
Symbol | |
ID | 4019248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3267849 |
End bp | 3268625 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637956775 |
Product | hypothetical protein |
Protein accession | YP_563731 |
Protein GI | 91794080 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000747307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGTTT TAGTGTCACC TGCAAAAACA CTGGATTTTG AAAATCCACC GCTTACCACA GAACATACTC GGCCTACGTT ACTTGATCAG AGCCAAGCTT TGATTAAGGA ATGTCAGAAG TTGACCCCAG TTCAGATAGC CTCTTTGATG AAGGTCAGCG ATAAAATAGC CGGCCTCAAT GCGGCTCGGT TTGCTCAATG GCAGCCTAAT TTCACCTTAG GTGAGGCGAA ACAAGCCATA TTCGCCTTTC GCGGTGACGT GTACACAGGC TTTGATGCCG ACAGCTTATC AGCCGCGCAA CTGCAATCGG CCCAAAACCA TTTGCGGATT CTTTCAGGGC TTTATGGTTT GCTTAAGCCA TTAGACTTGA TCTTACCTTA CCGATTAGAA ATGGGCACTC GCCTTGAAAA TGCCAAAGGC AGTAATCTGT ACGCATTTTG GGGAGAAATA ATCACAGATG AAGTCAATCG CGCCCTTATT GAGCAAGGGG ATGACATTAT AGTTAATTTA GCTTCGAACG AGTATTTTAA GGCCGTTAAA GAAAAGTCAC TGAAGGGACG TTTAGTCACT CCAGTTTTCA AAGATTGCAA AAATGGCCAA TACAAAGTCA TCAGTTTCTA TGCGAAAAAA GCCCGTGGAT TAATGGCGCG ATTTATTATC GAGCAGCAGC CCAAAGATTT AACTGCACTC ATTAGCTTTG ATCTCGACGG TTACTATTAC AGTGAAGCGC AATCGACACC ATCTAGCCCT GTATTTTTAC GGGATGAACA AGTTTGA
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Protein sequence | MLVLVSPAKT LDFENPPLTT EHTRPTLLDQ SQALIKECQK LTPVQIASLM KVSDKIAGLN AARFAQWQPN FTLGEAKQAI FAFRGDVYTG FDADSLSAAQ LQSAQNHLRI LSGLYGLLKP LDLILPYRLE MGTRLENAKG SNLYAFWGEI ITDEVNRALI EQGDDIIVNL ASNEYFKAVK EKSLKGRLVT PVFKDCKNGQ YKVISFYAKK ARGLMARFII EQQPKDLTAL ISFDLDGYYY SEAQSTPSSP VFLRDEQV
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