| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2715 |
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| Symbol | |
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| ID | 4019234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3251132 |
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| End bp | 3251521 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956761 |
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| Product | methylation |
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| Protein accession | YP_563717 |
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| Protein GI | 91794066 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0720544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGGA ACTTAGGCTT CAGTTTGGTC GAGCTAATGG TGGTCGTGGT CGTTATGGGG
CTACTAAGCA CACTTGTTTA TCCTAGCTAC GTGGAATACA TAGCTAGGGG AGCGAGAGGG
GATGCGGTTG CCGGTATCAT GCGAGTTGCT AATTTGCAGG AACAGTTTTA CTTAGATAAC
CGCAGCTTTG AAACCGATAT GACCAAACTT GGCTTACCGG CGGATCCCTT TGTTGTGGAT
AATCGTCTGT ATCAGATTGA TACGGCAGTG GTGGCGGGGG ATTACACTGT CACCGCCACA
GCTCTTGGTG TTCAAGCCAG TCGAGATACG GCTTGTGCGA CAATTTCTTT AACATCAGCC
GGGGTTAAGA GCCCTACGGA GTGTTGGTAA
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| Protein sequence | MKRNLGFSLV ELMVVVVVMG LLSTLVYPSY VEYIARGARG DAVAGIMRVA NLQEQFYLDN
RSFETDMTKL GLPADPFVVD NRLYQIDTAV VAGDYTVTAT ALGVQASRDT ACATISLTSA
GVKSPTECW
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