Gene Sden_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2546 
Symbol 
ID4019063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3044726 
End bp3046273 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content44% 
IMG OID637956590 
Productmetal-dependent phosphohydrolase 
Protein accessionYP_563548 
Protein GI91793897 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATTAT TTAAACAATC ATCAACTAGC CCTAAGAAAG ATGACAAGGC CGATGCGAGC 
CAATATTGGA AAGTGGTTAT TATTGACGAT GAACCTGGCA TTCACGATGT CACTAAGTTC
GCCTTGAATA GTTTCAACTT TGAAGGTAAA AGCCTTAAAT TTTATTCCTG TTACAGCGCA
GAGGAGGGCT TTGCGCTAAT GCGTGACGAA ACCGATATCG CGCTCGCCTT TATCGATGTA
GTGATGGAGA GCGATCAGGC GGGGTTAGAA TTAGTCCATA AAATCCGTAA CGAATTAGAT
AACCACTGCA CTAGGATCAT TCTTCGCACA GGCCAGCCAG GCAGTGCCCC AGAAGAGCAA
GTTATTCGTG AATACGATAT TAACGATTAT AAAGCAAAAA CAGAGCTCAC CGCTGCCAAG
TTAAAATCCT GCGTTTACAC CTCACTGCGA TCTTACCGTG ATATCAAAAT CATTGAACAA
AGCCAAAAAG GCATGGAGCG GGTTATTTCA GCGTCAAGTT CAGTGCTTAA GAGTCACACC
TTGCACCATT TTGGTAGTGC AGTACTGGAA CAGACACTGC AACTCTTGAA TCTAGACACC
TCAGCATTGT ATTTAGCCAG TTATCACCAA GATTTATACT TAGATACTCA AATGACCTTA
CTTGCTGCTA CCGGCGACAT GGTGAGTTAT AAGGAGATAG AGAATGTTGA ATCCTTACCT
GCCGATGTAA AAGAATACAT TATCGAAGCC ATCGCCCTTA AGACATCAAT AATCAATGAC
AATATTTATG TTGGTTTTTA TCAGTTTGGC CAAGATGTCA CCAGTATTCT GTATTTGGAA
CACAATACTG CACTGACAAC ACTTCAAGTG CGTATTTTAG AACTGTTTGC GGCTAATGTA
AGCTTAACCT TTGAGAATTT GGCGGGTAAA GAAAACATAC AACAGACTCA AAAAGAGCTG
ATCCTCATCA TAGGTGATGC AATAGAGCAG CGTAGCAAAG AGACTGGGGC ACATGTGCGC
AGAGTGGCCA TGATGAGTGA GATGCTTGCC ACACATTTGC AATTGGGTGA AAGTTTTATT
GAGACCATTC GCTATGCAGC GCCTTTGCAT GATGTGGGGA AAATTGGCAT TCCAGAGAGC
ATATTGCATA AGCCGGGTAA GCTTGACGAG GCAGAGTGGG AAATAATGAA AACCCATGCA
GAGAAAGGAT ATAGGTTGCT GGCAGGATCA AATCGCATTA TCGCTAAAAT GGGAGCAAGA
ATTGCTCACA CTCACCACGA ACGTTGGGAT GGCACAGGTT ACCCAAGAGG ATTAGTGGGC
GATGAAAGCC CCATAGAAGG GCGGATCATG GCCATCGTCG ATGTGATTGA TGCGTTATTG
TCAAAGCGCA GCTACAAAGA GGCTTGGCCT GTTGAAAAGG TAAGGGACTA CATTATAGCG
CAGTCGGGCA AGCAATTTGA TCCCACACTT TGTGGTGCAT GTTTGCACTT AATGGACAAG
CTTTCGGCCA TTCACAAGGA TTTCCCCGAT GAGAAATCGG TGGAGTGA
 
Protein sequence
MALFKQSSTS PKKDDKADAS QYWKVVIIDD EPGIHDVTKF ALNSFNFEGK SLKFYSCYSA 
EEGFALMRDE TDIALAFIDV VMESDQAGLE LVHKIRNELD NHCTRIILRT GQPGSAPEEQ
VIREYDINDY KAKTELTAAK LKSCVYTSLR SYRDIKIIEQ SQKGMERVIS ASSSVLKSHT
LHHFGSAVLE QTLQLLNLDT SALYLASYHQ DLYLDTQMTL LAATGDMVSY KEIENVESLP
ADVKEYIIEA IALKTSIIND NIYVGFYQFG QDVTSILYLE HNTALTTLQV RILELFAANV
SLTFENLAGK ENIQQTQKEL ILIIGDAIEQ RSKETGAHVR RVAMMSEMLA THLQLGESFI
ETIRYAAPLH DVGKIGIPES ILHKPGKLDE AEWEIMKTHA EKGYRLLAGS NRIIAKMGAR
IAHTHHERWD GTGYPRGLVG DESPIEGRIM AIVDVIDALL SKRSYKEAWP VEKVRDYIIA
QSGKQFDPTL CGACLHLMDK LSAIHKDFPD EKSVE