| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2516 |
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| Symbol | |
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| ID | 4019019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3003236 |
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| End bp | 3006652 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956547 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_563519 |
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| Protein GI | 91793868 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0576231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAA AACAGATAAA ACTTGCTGGA TTTAAATCCT TTGTCGATGT GACCAAAATT
CCCTTCGAGC AGCAACTCTC AGCGATTATT GGTCCGAATG GTTGCGGTAA ATCCAACATC
ATAGACGCGG TGCGCTGGGT GCTTGGGGAA AGCTCGGCCA AGAATCTTCG CGGCGATTCG
ATGACAGACG TTATCTTCAA TGGCTCGAGT GTGCGCAGGC CAGTCTCTGT GGCTGGGGTT
GAACTGGTGT TTGACAACAG CCTAGGGCGA CTCGCTGGTC AGTATGCCAG TTATCAGGAA
ATTTCGGTTA AGCGTCAGGT GAGCCGTGAT GGCGACAGCT TTTACTTTCT CAATGGACAA
AAGTGTCGCC GCAAAGACAT TACCGACTTG TTTATGGGCA CAGGCCTTGG GCCACGCAGT
TATGCCATCA TAGAACAGGG CACAATTTCA CGCTTAATAG AATCTCGGCC GCAAGATTTG
CGGGTATTTA TCGAAGAAGC TGCGGGTATT TCTCGTTATA AAGAACGCCG TAAAGAGACA
GAGAATCGCA TTCGCCATAC CCGAGATAAT TTAGAACGCT TAAATGATAT TCGACTCGAA
CTTGGCAGCC AACTTGATAA ATTGGCTGAA CAGGCTAAGT CGGCGCTCGC TTATCGCGAG
TTCAAACAAC AAGAACGTCA GCTACAGGCA CAGTTGTTGG TGGTGCGTTA TCAAGAGTTA
GCACTTAACA CTGAGAAAAT AGATAAAGAA ATTCAGCTGC TTGAACTTGA ACTTGCCGAA
ATTAATGCGG CGGCACAAGC GGCATCCCTG AGCCTACTGC AATGGCAAAC TCAGTTAGCC
GAGCTTAACG AACAAGAGCA GCAGCAAGTC GAGCATTTTT ATCAGAGTAG GACTGATATC
GCCAAATGCG AGCAGGCCCT ACATCATTGG CAAACTCAAC ATAGTCAGTG GCAACAGCAA
AAACAGGCAT TAACCACCCA GCTTGCGCAA ACCGCTCAAG ATAACGTTCA AGGTGAAAAC
GAACTGCAAA GGCTAGAAGC CGATCACGTT CAGCAACACA CTGTGTGGGA GGCGAGTCAG
TACGCCTTAG AAATACTCGA TGAACAAATA AACCAACTGG AGGAGTCCAG TGACGCGCTT
AATGAAAACT TAAGCCGCTG TCAGGAAACG TTAGCCAACG CAAAAATGGC TCATGCAGTA
GAGAATGCCA AGCGTGAGCA CACTCAGAAG AACTTGTTGC ACGCTGAGCA TAAACTCACT
GAGCTTGCTA ATGAACTTGA AACCCTACAA GCCATAGATA ACAGTGATGC TCGCCTGCAA
CTAAGCCAAG CCTTGAGTGA TAACGCCAAA GCCTTGTCAC AGCAGACTTT GCTTAGCGCT
GAGCATGAAC ATTCAATGCA GGCCCAAGAG CAGGCACTCA ATGACAAACT CGCTCATCAT
CAACAGCTGA CAACCACACT GACCTCAGCC AAGGCCCGCC ATCAAGTCAT AGAGGAATGG
CTCGCCGGTG AGCAAGAAAG TGATGGTAGC CAGTTATTGT GGCAGCATAT AAAAGTGACC
CCAGGTTGGG AGCTTGCGGT TGAATTGGCA TTGCAACCAG TGTTGCAGGC GAACGTATTG
CAAGGTGAGT CCAAGGCAGG GTTTATTCAT TCAGCTGAAT ATGAGTCTAA CCATCAAGCT
TTTTCAGCGG CGGTAAACTT AACCCCGTGG ACTGAGCGAC TGATTTGGGT GGAAGATTTA
GCTTATGCCA AGGCACACCT TAATGAACTT AAACCGCAGC AATGCTTTGT CAGTCGTGAT
GGGTATTTAT TGGGCCATGG CTTCTTACTG CAAGCTCAAA GTCAGAAACA ATCTAATTTG
CTCCTGACTC AAGAGCTTAA TCAGCTCTCA TCCCAGATAA GTAGACTAGC TTCAGAGGTT
GAGCTTAGCG AACAGCAAGT GCTGGACGCG AGAAACAATC TTGCAGAGGT AAAGTTGCTG
GCACTCGAGT GTCAACGGCA AGGGCATGCG CTTGCGCTAA AGAAACAAGC CTTATCCTCT
GAGATGGCAA AATTGTTACA TCAAGATGAC GCCAAAGAGA CAAATCTGGC AAAGATAGCG
TCATCCCAAG CCCAGCTTGA ACAACAGCGT GAGGATAGCC AAGTGCAGCT ATTGGCATTG
ATGACGCTAT TGGACAGTCA AGATGATGAG TTACAAGGAT TATCAAAAAA ACAACAAGAG
CTTAATCAAG AGTGGCTGTC AGTGAGTGCC CAGTTAAGGC AAGCTAAAGC GCAGCGCATT
GAGCAAGATA ACATCAAGCG TCAGCATGAG CATGCCCGTC AAACCTTGAG CACTCAAGTG
GCGCTGCAGC AACAAACACT GCAACAAATT GCACTTAAGC GGCAGGAGTT GAACCACAGC
TTGGCTCAGC TTGAGCAAGC CAGTCGCCAA CAGCAAAGCA GTCAAGAGCA AGACCAACAA
GCGCTGCTTG AACAGAATCT TGCGACCTTA CTCCAGACTC AGGCGCAGCA GCAGGGGCTG
CTCAATGATA CGCGTGCTAA ACAAGCACAA GTGCAAATCG AGCTAGATAA TGTACTATTA
ACGCAAAAAC AACAGCTTGG TATCATAGAA GGCTTGACTC AAAAGATAGG CGCGTTAAAG
TTACGTCGTG AGGGTTTTAA AGGTCAAGCG GATGGCCAAC AGCAATTGCT CGATGAGCAT
AAAGTGGATG TGTCTGCTGT CGCGCGTCAA CTCAAGCCAG ATGTGAAGAC GCAGCAGTTA
AGTAATGAGC TAGATAAGTT GCGGGCAGAG ATCCTAAAGT TGGGTGCCAT TAACCTTGCC
GCTATCGAAG AATATGAAGT ACAAGAGCAG CGTAAGGCCT ATTTGGATGC TCAAGATGAG
GATCTCAATA AAGGGTTAAT GATCCTCGAA GATGCCATTC GTAAGATTGA CAAGGAAACC
CGCAGCCGCT TCAAGGCCAC GTTTGAGGCC GTGAATAAAG ATTTAGGCTT GTTATTTCCT
AAAGTGTTTG GCGGTGGTCA GGCATATTTA GCGTTAACAG AAGATGACTT ACTGGAAACT
GGCGTTACCA TTATGGCGCA GCCACCAGGA AAGAAGAACA GCAGCATTCA TTTATTAAGC
GGTGGAGAAA AAGCCTTAAC CGCATTATCA TTGGTGTTCG CCATCTTTAG GCTGAATCCG
GCACCTTTTT GCATGCTAGA TGAAGTCGAT GCGCCACTTG ATGATGCCAA CGTAGAACGT
TTTTGCCGTT TATTACAAGA AATGTCCCAA AGCGTGCAGT TTATATACAT TAGCCATAAT
AAAATAACCA TGGAAATGGC AGATCAATTA ATTGGCGTTA CTATGCATGA ACCCGGCGTT
TCACGTATAG TTGCTGTGGA TATAGAACAA GCGGTCGCCA TGGCGGACGC GCTATAA
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| Protein sequence | MRLKQIKLAG FKSFVDVTKI PFEQQLSAII GPNGCGKSNI IDAVRWVLGE SSAKNLRGDS
MTDVIFNGSS VRRPVSVAGV ELVFDNSLGR LAGQYASYQE ISVKRQVSRD GDSFYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESRPQDL RVFIEEAAGI SRYKERRKET
ENRIRHTRDN LERLNDIRLE LGSQLDKLAE QAKSALAYRE FKQQERQLQA QLLVVRYQEL
ALNTEKIDKE IQLLELELAE INAAAQAASL SLLQWQTQLA ELNEQEQQQV EHFYQSRTDI
AKCEQALHHW QTQHSQWQQQ KQALTTQLAQ TAQDNVQGEN ELQRLEADHV QQHTVWEASQ
YALEILDEQI NQLEESSDAL NENLSRCQET LANAKMAHAV ENAKREHTQK NLLHAEHKLT
ELANELETLQ AIDNSDARLQ LSQALSDNAK ALSQQTLLSA EHEHSMQAQE QALNDKLAHH
QQLTTTLTSA KARHQVIEEW LAGEQESDGS QLLWQHIKVT PGWELAVELA LQPVLQANVL
QGESKAGFIH SAEYESNHQA FSAAVNLTPW TERLIWVEDL AYAKAHLNEL KPQQCFVSRD
GYLLGHGFLL QAQSQKQSNL LLTQELNQLS SQISRLASEV ELSEQQVLDA RNNLAEVKLL
ALECQRQGHA LALKKQALSS EMAKLLHQDD AKETNLAKIA SSQAQLEQQR EDSQVQLLAL
MTLLDSQDDE LQGLSKKQQE LNQEWLSVSA QLRQAKAQRI EQDNIKRQHE HARQTLSTQV
ALQQQTLQQI ALKRQELNHS LAQLEQASRQ QQSSQEQDQQ ALLEQNLATL LQTQAQQQGL
LNDTRAKQAQ VQIELDNVLL TQKQQLGIIE GLTQKIGALK LRREGFKGQA DGQQQLLDEH
KVDVSAVARQ LKPDVKTQQL SNELDKLRAE ILKLGAINLA AIEEYEVQEQ RKAYLDAQDE
DLNKGLMILE DAIRKIDKET RSRFKATFEA VNKDLGLLFP KVFGGGQAYL ALTEDDLLET
GVTIMAQPPG KKNSSIHLLS GGEKALTALS LVFAIFRLNP APFCMLDEVD APLDDANVER
FCRLLQEMSQ SVQFIYISHN KITMEMADQL IGVTMHEPGV SRIVAVDIEQ AVAMADAL
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