Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2420 |
Symbol | |
ID | 4018918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2881243 |
End bp | 2882490 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637956447 |
Product | tetratricopeptide region |
Protein accession | YP_563423 |
Protein GI | 91793772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0369849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAAG TTAACCAAAT TGCTAGCGTA CTAATACTCT CTCTTTGTGG TGGCGCATTT GTGTCATCCA GCGCGTTTGC TGCTGCAAAT TGTGAAATTG ATAAACGTCA GTCTAAAGCC GTCGGCGAAA GTGTCGGTAA AAAGGTGCAG AAGTCTTTTG AGGCTTACAC TAATGGTGAA CTGGATAACG CCATAGGCCT TTTGCTTGAA GTCAATCCTA AAGGCGGTTT TGACAAAGCC TATGTCGATC GTATGCTTGG CAACTTTTAT GCCGAAAAAG GTCAGATGAA AACTGCAGTT AAGTACCTTA AAACTGCTGT AGAAGCTGAT ATTTTAGGTG GTGTAGACCA CGCAGGTACC ATGCGTCTTT ATGCTGATTT ATTACTTCAA GAGAAGCAGT TTAAAGAATC TATTCCTTAC TACTATAAGT GGATGGAATT TACCTGTAAG TCAGATGCAC AGACTTATCG TCGTATCGGT ATTGCCTATA GCGAGCTTAA GGATTGGAAC AAGGTGCTGC AGGTTGCAGA TAAAGGATTA TCTTTATCTA CTGAGCCTGA TAAAAGCCTT TACCAAATGA AATTAACTGC ATACTTCAAT CAAAAGAAGT ATAAAGATGC AGTTAAGGTT CTTGAGGTTA TGGTGCCCTT GTTCCAAGAC GATAAACGCC TTTGGGTTCA GCTAGCTCAG TTTTATCTGA TGACAGAAGA CTATGATAAA GCCTTAGCGA CCTATGACTT ATCTTATAAG AATGGTTTCC TTGAGACTGA CAGTAACATT ACGCGGTTAT CGCAGTTATT GGCGCAAAAA GGATCACCTT ATAAAGCAGC AGTCATTTAT GAGAAGCATA TGAAATCAGG TTTAATTAAA GAATCTGAAA AAACACTTTC GACTCTGGCC GGTTTTTTCC AGAATGCGAA AGAGTTTAAA CAAGCTGCTC ATTATTATGG TAAAGCTGCT GTTTTAGGCC GCGATGGTGA ATTATACTTA AAGCAAGGTC GTTTATTATC TTTAGATGAG AATTACTCTG CAGCCATTCC AGCACTTAAA AAGGCATTGG ATGCGGGTCT TAAGCACCCT GGTGAAGCGC AATTTGAATT GGCATTGGCT TATTTGAGTC AAAAGAAATA CAAAGCTGCA TACCAGAGAG CCGTTCTTGC TGCTAAAGAC AAGAAAACTG AACGTAGTGC CAACAGCTAT ATTGCTTATA TAAAAGAGAA AGCTCGGATA TATAACATAT CTTTGTGA
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Protein sequence | MRKVNQIASV LILSLCGGAF VSSSAFAAAN CEIDKRQSKA VGESVGKKVQ KSFEAYTNGE LDNAIGLLLE VNPKGGFDKA YVDRMLGNFY AEKGQMKTAV KYLKTAVEAD ILGGVDHAGT MRLYADLLLQ EKQFKESIPY YYKWMEFTCK SDAQTYRRIG IAYSELKDWN KVLQVADKGL SLSTEPDKSL YQMKLTAYFN QKKYKDAVKV LEVMVPLFQD DKRLWVQLAQ FYLMTEDYDK ALATYDLSYK NGFLETDSNI TRLSQLLAQK GSPYKAAVIY EKHMKSGLIK ESEKTLSTLA GFFQNAKEFK QAAHYYGKAA VLGRDGELYL KQGRLLSLDE NYSAAIPALK KALDAGLKHP GEAQFELALA YLSQKKYKAA YQRAVLAAKD KKTERSANSY IAYIKEKARI YNISL
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