Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2157 |
Symbol | |
ID | 4018649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2553988 |
End bp | 2555454 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637956181 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_563162 |
Protein GI | 91793511 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGT TAAGCGTGAA TTCCCATCCT TTATTAAGAG TGTTGTTAAA GGGGTTGTTA AGGGCGCCGT TAAGGTCATC TTTTAGTGCG TGCTTAATTC AAAATGTCAT CTCCTATTGT AGGGTCGCAC TCGCCTCAAT ACTTAAAGGA TTAGTGCTGC TAGCTAGCCT TTATTTAGGC GCCGTTAATA GCGCGACACT GGCAAGCGTT GAGTCAGAAA TATTAACTGA AATCAAGCAG TCAAATCAGG CTTATCAGCG TCAGTTAAGG GCCATGACCA CTGAGCGTCA GGGCTTATTG CAACAACTCG CCGAGCAAGA ACGAAAGCTT AAAACCCTCA GCACCAAAGC GGCCAGCATT ACGCGCGGCC AAGATGAGCA GAGCATGAGT TTGGCAACCT TAGCGCAGCG ATTGCAATCG TGGAAGCAGC AGCAAGACTA CCTTAAGCAT TTATTAAGCG GCATTTCATC AGCAAAAGCC ATAGAAACGC CCCAGCAGCT CAGTGCTTAT TTGGCAGGTT TTGCCAAACC AAGCGAATTT ATAAAGCAAG ATATCGCCTT AAGCAGTGGC GAGCTTATCT CAGGCGCCAT GCTAAGCCTT GGCCCTATGC ATTGGTTTAT CAGTGATGAT GACGAGAAGG GCGGATTGCT GACTCAAGTC GAGCAGCAGT GGCAGCTGGC ATTAAGTTTT GATGAGGCGC AGCTGGCACA ACTTAGCGCT GTGAAAACGG ACCATCAAGG CGTACTGGCG ATTGACCCCA GTAATAATCG CAGTTTAGTG TTGGCGCAAC ATCAAGAGTC GTTCGCGGAG CATTTAGGCA AGGGCGGCAT TTGGGTTATC CCTATTATGG GCTTTGCTTT ATTAGCGCTG ATTATCGCCC TAGTGAAAGC GGTGACCTTA TTTAGACTCG AGAAAGTTCA GCCGTTATCG CAAAAAGTTC AGCCGTTCTC ACAAAAAGGC GAGCCGTTAT CGCAATTAGC AGGCGCTGGC CTTAAGAGGG CCGCCCTTGG GCAGTATCAA CAGGCACTAG CAGATATTGC TAAGCAATAC CCACAGATTG AGGCGCGCCA GCAAAGGGAT GATTTGCTAT TGGATAGCCT TATTCAGACT AAGCGAGAAA TCGAGCGCGG CTTAACGGCG ATTGCGGTTA CGGCATCGGT GGCCCCTTTA CTCGGATTGC TTGGCACTGT GAGCGGGATG ATCCAAACCT TTAAGCTGAT GACCCTCTTT GGCGCGGGGG ATGCTAATGC TGTGTCCGGA GGGATTTCAG AGTCTTTAGT GACCACAGAG CTTGGGCTTA TTGTGGCTAT TCCTGCGCTT ATCGCTCATG CGCTGATGTC GCGCCGTTGT CATCACTTTA TGGCAGGGCT TGAATCTTAT GCAGTGGCCT TGTCTCACCA TTCAATAGTT GGAGATAACG AGCCTATCAT CACGAGTCAC AGCAAAGAGG CGGTCCATGT TGCCTGA
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Protein sequence | MAQLSVNSHP LLRVLLKGLL RAPLRSSFSA CLIQNVISYC RVALASILKG LVLLASLYLG AVNSATLASV ESEILTEIKQ SNQAYQRQLR AMTTERQGLL QQLAEQERKL KTLSTKAASI TRGQDEQSMS LATLAQRLQS WKQQQDYLKH LLSGISSAKA IETPQQLSAY LAGFAKPSEF IKQDIALSSG ELISGAMLSL GPMHWFISDD DEKGGLLTQV EQQWQLALSF DEAQLAQLSA VKTDHQGVLA IDPSNNRSLV LAQHQESFAE HLGKGGIWVI PIMGFALLAL IIALVKAVTL FRLEKVQPLS QKVQPFSQKG EPLSQLAGAG LKRAALGQYQ QALADIAKQY PQIEARQQRD DLLLDSLIQT KREIERGLTA IAVTASVAPL LGLLGTVSGM IQTFKLMTLF GAGDANAVSG GISESLVTTE LGLIVAIPAL IAHALMSRRC HHFMAGLESY AVALSHHSIV GDNEPIITSH SKEAVHVA
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