Gene Sden_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2041 
Symbol 
ID4018533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2421902 
End bp2422525 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID637956065 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_563046 
Protein GI91793395 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.239725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGC CGCTCAGTGA AGCACTGCTA GATGTGATAG CAGATGCGTT AGTGGATAAG 
GGTTATGTGA TCCTGTCCGA TATTATTCCA CAAGAAATCA GTTTAACGTT ACTTGGGAAA 
ATGCGCGCCG CTCAAATTTG GGAGTTTGAG CAAGCCGCCA TTGGTCGCGG TATAGAACAG 
CAAATTAACA CGGACATTCG GGCCGACAAG ATAAGTTGGC TGGAAAATGA TGATGCCATC 
GACAGCGGTT ACTTAAACTT GATGGAGCAG CTTCGTGAAG GTTTGAACCT GCGACTTTTT 
ATGGGGCTAT TCGATTATGA GAGTCATTAT GCTGTCTATG AGACAGGGGC ATTTTACCGT 
AAACACGTAG ATGCCCTAAA GGGCAGTCAA AATCGGATTT TAAGTACAGT GTTTTTCTTA 
AATCCTCATT GGCAGCCTGA TCATGGCGGC GAATTGGTCA TTTATGATGA AGATGATAGT 
CAACTGGATA CCGTGCCGCC ACGCATGGGC ACCATGGCTA TTTTCTTAAG TGAACGTTTT 
CCGCACGAAG TGCGTGAAAC CTTCGCTACC CGCATTAGTA TTGCCGGTTG GTTTAGGGTG 
AGTCATGCCA TCCACGGATT CTAA
 
Protein sequence
MISPLSEALL DVIADALVDK GYVILSDIIP QEISLTLLGK MRAAQIWEFE QAAIGRGIEQ 
QINTDIRADK ISWLENDDAI DSGYLNLMEQ LREGLNLRLF MGLFDYESHY AVYETGAFYR 
KHVDALKGSQ NRILSTVFFL NPHWQPDHGG ELVIYDEDDS QLDTVPPRMG TMAIFLSERF 
PHEVRETFAT RISIAGWFRV SHAIHGF