Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1906 |
Symbol | |
ID | 4018394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2237943 |
End bp | 2238689 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637955927 |
Product | transcriptional regulatory protein-like protein |
Protein accession | YP_562912 |
Protein GI | 91793261 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00141074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATCT TAATGAAAAT GGTTATCGTT TATGTGGTTT GTAATATGGA TAAAATACTA CTCATTGTTG AAGAATTGAA CACGGCGCAG TTTTTTATAG CTGGCCTGTC TGAACAAGGC TTCGAGGTTA TATGGGCCAA GAGTGCAAAG GATGGCATAG CAGCAATGAC GCAATGCGAG TTTGTGGCAG TGCTGTTTGA TCTACACTTG CTGCAAGATA AGAACAAAGC CGATAGTCAT GAGTTTTGGC GTAGTCAATT ACAAGATCCT CAGCGTGCCG TTGCCGCATT GGCATACTCT AATAGTGACC AAGAACGCTT AGAGGCATTA GAGTTAGGGG CAGATATGTA TTTAAAACGC CCATTTATCA TCAAAGAGTT ATTGCTTAAC ATAGATGCAA TACATCGAAG GGCAGAGCGT GTCGATAAGG CTAGGCAATC AATATCAAGC ACAATTAGCT TCGACGAACT TCACTATACG ATTAATACAC AGCAACAAAC TCTGGTGTTA ACACAAACTG AATTTTGGCT GTTTAAGTAT TTATTTGAAC GCGGTGGTGA GGTTGTCACT AAAGAAGAGT TGCAACGTAA GGTACTGAAC AAACCTTTGG GGCGTTTTGA TCGAAATTTG GACATGCACG TCAGTAATAC CCGCCGTAAA CTAACTCAAT TAAGCCTACC CAGAGAGTGG ATAAACACTG TCAGAGGGCA AGGTTATAGC TTCAACCCTG TGATTAATGA GCCATAG
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Protein sequence | MVILMKMVIV YVVCNMDKIL LIVEELNTAQ FFIAGLSEQG FEVIWAKSAK DGIAAMTQCE FVAVLFDLHL LQDKNKADSH EFWRSQLQDP QRAVAALAYS NSDQERLEAL ELGADMYLKR PFIIKELLLN IDAIHRRAER VDKARQSISS TISFDELHYT INTQQQTLVL TQTEFWLFKY LFERGGEVVT KEELQRKVLN KPLGRFDRNL DMHVSNTRRK LTQLSLPREW INTVRGQGYS FNPVINEP
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