Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1784 |
Symbol | |
ID | 4018263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2108237 |
End bp | 2108716 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955797 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_562791 |
Protein GI | 91793140 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0781853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTTAG CAACATTTGG TGCAGGTTGT TTTTGGGGTG TAGAGCATTT CTTCCGTGAA GTCGAGGGAG TCACTCAGGC GACTTGTGGT TACATGGGGG GGAAAGACAC AGCAGTCACC TATAAAGAAG TAAAAACCGG CACCACAGGC CACGCCGAAG TGGTGCAAGT GGAATTCGAT CCCGAACGTG TAAGCTTCAA TGCACTGCTT GAATTTTTTT GGAAAAATCA CAACCCGACT ATGCTTAACA TGCAAGGGGG TGACATAGGC TCACAATACC GCAGTACTAT CTTTTTTCAT GACAAAGAAC AAAAACAGCA GGCAGAAGCT TCTAAGCTTG CCCTAGCCCG CAGTGGCAAA TGGGGACTTA GGCCAATAGT CACTGAAATA GTGCCCGTAC AAACCTTTCA TATCGCCGAA GAGTATCACC AAAATTATTT AGAAAAGAAC AACCTACCTA GTTGCCATTT AACTTATTAA
|
Protein sequence | MALATFGAGC FWGVEHFFRE VEGVTQATCG YMGGKDTAVT YKEVKTGTTG HAEVVQVEFD PERVSFNALL EFFWKNHNPT MLNMQGGDIG SQYRSTIFFH DKEQKQQAEA SKLALARSGK WGLRPIVTEI VPVQTFHIAE EYHQNYLEKN NLPSCHLTY
|
| |