Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1617 |
Symbol | hisD |
ID | 4018092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1880079 |
End bp | 1881395 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637955627 |
Product | histidinol dehydrogenase |
Protein accession | YP_562624 |
Protein GI | 91792973 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTC TTAATTGGGG CGCTTTAACA CCCCAGAAGC AGCAACAAAC CTTAACGCGT TCCCCCTTAA TTGGTGACTT AAGTGCCTTG CAAAGCGTGC GGGATATTAT TGAAGAGATC TGCAATCAAG GCGATGCGGC TTTATTACGC TTTAACAAGC GTTTCGATGG TGTTGAGCTA ACGGAGCTTG CATTGACGGC TGAGCAAATC ACTGCCGCCT GCAATCGTGT GAGCTTAGAT GTCAAACAAG CGGTAGCCCA AGCTGTGAGC AATATTGAAA GCTTTCACCG GGCGCAGGTG TTTCAAGGGG TTGATATAGA AACCCAAGCG GGCATTCGCT GTGAGCTTAG AAGTGAGCCC ATTGAACGTG TGGGTTTGTA TATTCCTGGC GGCACTGCGC CGCTGATTTC AACCGTGATG ATGCTCGCGC TGCCTGCAAA AATTGCCGGC TGTGAAAAGC GCATACTCAT GAGCCCGCCC CCCATAAATG ATGCCATTAT CTATGCCGCT AATGTGTGCG GCATTACGGA TATTTTCCAG GTGGGCGGCG CACAGGCCAT TGCCGCATTA GCCTTTGGCA CAGAATCTAT CCCCAATGTG GATAAAATTT TTGGCCCAGG GAATCGCTAT GTGACTGAAG CGAAACGCTT AGTGTCCCAA GATAGCCGCA TCAGTGTGTC CATTGATATG CCAGCTGGGC CATCTGAAGT GCTAGTGATT GCCGATAAAG CTGCCAATCC TAGATTTGTG GCGGCGGACT TATTATCTCA AGCCGAGCAC GGCGTTGACT CACAAGTCAT GCTAGTGACA GATTCGCAGT TACTGGCTGA GCAAGTGAAT CTGGCATTAA TGGAGCAACT AGCGCAGTTG AGCCGTAAAG ATATCGCCGC AAAAGCCCTT GAATGCAGTC GCAGCATCAT TGTCAGCGAT ATGAAACAGG CCGCCATAGT GTCAAATCGC TATGGCCCAG AGCATTTGAT TATTCAAACG GCTAAGCCCC GTGAGGTATT AAAGCAAATT CGCGGCGCAG GCTCGGTATT TTTAGGCGCT TACACCCCTG AATCTGTTGG GGATTATGCC AGCGGCACTA ACCATGTGTT GCCGACTTAT GGTTATAGCC GCTCGGTTTC AAGTTTGTCA CTGGCTGACT TTAGTCGCCG CTTTACCGTG CAAGAGCTTA GCCCCCAAGG TTTGCAAACG CTAGGCAAAA CGGTGATGGT GCTGGCTGAA AATGAGCTGT TAGATGCCCA TAAAAATGCC ATTGCCCTGC GATTAGATTA TTTAGCCACT GAGGGTAGAT GCTATGACAC GCTTTAA
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Protein sequence | MQILNWGALT PQKQQQTLTR SPLIGDLSAL QSVRDIIEEI CNQGDAALLR FNKRFDGVEL TELALTAEQI TAACNRVSLD VKQAVAQAVS NIESFHRAQV FQGVDIETQA GIRCELRSEP IERVGLYIPG GTAPLISTVM MLALPAKIAG CEKRILMSPP PINDAIIYAA NVCGITDIFQ VGGAQAIAAL AFGTESIPNV DKIFGPGNRY VTEAKRLVSQ DSRISVSIDM PAGPSEVLVI ADKAANPRFV AADLLSQAEH GVDSQVMLVT DSQLLAEQVN LALMEQLAQL SRKDIAAKAL ECSRSIIVSD MKQAAIVSNR YGPEHLIIQT AKPREVLKQI RGAGSVFLGA YTPESVGDYA SGTNHVLPTY GYSRSVSSLS LADFSRRFTV QELSPQGLQT LGKTVMVLAE NELLDAHKNA IALRLDYLAT EGRCYDTL
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