Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1616 |
Symbol | |
ID | 4018091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1879034 |
End bp | 1880092 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637955626 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_562623 |
Protein GI | 91792972 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCT TTAATCCACG CGCCCTTGCA AGACAAGAGC TATTAAGCTT AACCCCCTAC CAAAGTGCGA GACGCATTGG CGGCCAAGGG GACATTTGGA TCAATGCCAA TGAGTCCCCC TTTAATAATA GTGACTTAGA CAAGGTGAAC CGTTATCCAG AATGTCAGCC AGCTGAGCTC ATCAATGCCT ACAGCCGCTA CTCTGGCGTT AAACCAAGCC AGATTATCGC GAGCCGCGGC GCCGACGAAG CCATTGAATT ACTCATTCGA ACCTTTTGTG TGCCAGGAAA AGACAGCATC GCTTGCTTTG GCCCCACTTA TGGCATGTAT GCCATCAGTG CAGCCACCTT TAACGTCGGC GTGATCGCAC TTAACTTAAC GTATGATTAT CAGTTACCAG ATCTGTGGCC AACCCTTATC CAGCAAGCAA CAGTCGGCAA GGCCAAAATT GTGTTTATTT GTAATCCCAA TAACCCAACC GGCACTGTGA TTGCAAAAGC TGACATCGAG CAAGCCATCC AAGCCACGCC CGAATCCATA GTGGTTGTTG ATGAAGCTTA TATCGAGTTT TGCCCTGAAT ACAGCGTGGC GGATTTATTG GATTCCTACC CTAATCTTGT GGTGCTGCGC ACTTTATCTA AAGCCTTTGC TTTAGCCGGT GCACGCTGCG GTTTTTTACT GGCCAATGAT GAAGTGATTG ATTTAGTGAT GCGGGTCATC GCGCCCTACC CTGTGCCATT GCCAGTATCT GAGCTTGCAA TATCAGCCTT AAGTCCAACT GGCATAGACA CAATGCGCAC TCAAGTTGCT AGTCTAATGG AGCAAGGTAA GCGCTTAAGC GATGCGCTAA GCGCCTATGG GGCCAAGGTG CTCCCCGCCA AGGGCAACTA TGTGTTGGCT CAATTTGACG ATGTGCCCAA TGTCGCCACT ATGCTAAGAG ATGCAGGCAT TGTTGCTAGG GCCTATAAAG ATCCACGCCT TAGGGATGCG ATACGCTTTA GCTTCACATC GGCTGCAGAT ACCGATGTGA TTATCTCGCT CTTCACTAAA GTGAACTAA
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Protein sequence | MTRFNPRALA RQELLSLTPY QSARRIGGQG DIWINANESP FNNSDLDKVN RYPECQPAEL INAYSRYSGV KPSQIIASRG ADEAIELLIR TFCVPGKDSI ACFGPTYGMY AISAATFNVG VIALNLTYDY QLPDLWPTLI QQATVGKAKI VFICNPNNPT GTVIAKADIE QAIQATPESI VVVDEAYIEF CPEYSVADLL DSYPNLVVLR TLSKAFALAG ARCGFLLAND EVIDLVMRVI APYPVPLPVS ELAISALSPT GIDTMRTQVA SLMEQGKRLS DALSAYGAKV LPAKGNYVLA QFDDVPNVAT MLRDAGIVAR AYKDPRLRDA IRFSFTSAAD TDVIISLFTK VN
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