Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1512 |
Symbol | |
ID | 4017391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1759191 |
End bp | 1759931 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955522 |
Product | regulatory protein, TetR |
Protein accession | YP_562520 |
Protein GI | 91792869 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATA AAGATAAGAG AATTGGTCGA CAATCTGCTG AAAATACGAA ACAAACCCGT AAAGATATCA TAGATGCGGC GACGCAATTA TTTTGTCAGC AGGGTTATGC TAAGGTGAGC CTAAGAGCCA TTAGTGAGCA AGCCGGTGTG TCCCATGGGC TTATTCGACA TCACTTCGGC ACCAAGTTTC AAGTGTGGCA GCAGGTTTGC GATCGCATCG AAGCGTATTT TCATCAATTC GTATCGTCTC TCACTCAAGA ATTTTCTCCA GAGCTTGCCA GTAATGAACG ACTGTTTTAT GTGATTATTA ATCTGCAAGC CGTGTTGATG TTAGATCCGC GTCCCATTCA GCTAATGGCC GATTCAATGG GGCAAGATGC GCAAATGCAT GATTATATTT TTGATGACGA TGATGAGCTG GCGACATTAA TCGCATCCAT GCTTAAGCAG TGTCATCAAG AAGGACTGGC AACAGAGTTG GCAGTGAAAG AGCTTGAATG GTTAACCTGT GCCAGTGCTA ACAGTTTTGT GAGCCTAGCG CCTTTAGCTA AAAATACCTA CCCAGGGTTA TCGTTTGAGC AAGTGCAGGT GAAGCATTGG CGGTTATTTG CGCGCTCAAT ATGTGCGTTA TTAGAGTTAG ATATTGGCAT TATTCCTAAA ATAGAGAACT TGGCGAGTTT TGTGGCTAAG AGTCAATTTA TCACGGACTT TAGTAACAAC TTTGATTGTG AAACCCTGTA G
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Protein sequence | MPDKDKRIGR QSAENTKQTR KDIIDAATQL FCQQGYAKVS LRAISEQAGV SHGLIRHHFG TKFQVWQQVC DRIEAYFHQF VSSLTQEFSP ELASNERLFY VIINLQAVLM LDPRPIQLMA DSMGQDAQMH DYIFDDDDEL ATLIASMLKQ CHQEGLATEL AVKELEWLTC ASANSFVSLA PLAKNTYPGL SFEQVQVKHW RLFARSICAL LELDIGIIPK IENLASFVAK SQFITDFSNN FDCETL
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