| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1227 |
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| Symbol | |
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| ID | 4017276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1430810 |
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| End bp | 1431532 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955223 |
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| Product | hypothetical protein |
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| Protein accession | YP_562236 |
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| Protein GI | 91792585 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCAGAG CATATCAAAA TAAGAAAGAG TCCATGGCCA AAACCGCTGG CCAGAAGACG
CGCATTTACT CACGTTACGG TAAAGAGATT TACATATGTG CTAAACAAGG TGGCGTTGAC
CCCGATGGTA ATTTAGCCCT TCGCAGCTTG ATTGCCCGCG CGAAGAAAGA TCAGGTGCCG
GCACACGTTA TCGAACGTGG CATTGAAAAA GCCCGTGGTG GTGGCGGTGA AGATTATGAT
ACAGCCCGTT ATGAAGGTTT TGGCCCAGGT GGCTGCATGG TCATTGTTGA CTGCTTAACC
GATAACGGTA AGCGTACCTT CACCGAAGTG CGTCAGGCCT TCGTGAAAAA TGATGCCAAA
CTGGGTGGCC CAGGTACTGT TGGGCACATG TTCGATCATC AGGCGGTATT CGTATTTGAA
GGTGATGACG ATGAAGCCAT CTTAGAACTA CTGATGATGG CTGACGTCGA TGTGACCGAT
GTCGAGCTAG ACGATGGTAT TATCAGCGTA TTTGCCCCTG TATCTGAGTT TAGCAATGCG
CGTATCGCCT TAACAGAAGC CTTTCCAGAC ATAGATTTCA AGGTAGAGAA CTTAGCCTTT
GTGCCCCAGA CCATGACTGA AATCACAGGT GAAGACATTG AAACATTTGA GAAATTTTTA
GCCGCACTTG ATGATTGTGA TGACGTACAG AACGTTTATC ATAATGCCGA AATTGCCGAT
TAG
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| Protein sequence | MGRAYQNKKE SMAKTAGQKT RIYSRYGKEI YICAKQGGVD PDGNLALRSL IARAKKDQVP
AHVIERGIEK ARGGGGEDYD TARYEGFGPG GCMVIVDCLT DNGKRTFTEV RQAFVKNDAK
LGGPGTVGHM FDHQAVFVFE GDDDEAILEL LMMADVDVTD VELDDGIISV FAPVSEFSNA
RIALTEAFPD IDFKVENLAF VPQTMTEITG EDIETFEKFL AALDDCDDVQ NVYHNAEIAD
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